Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QAO28_RS00865 Genome accession   NZ_CP123104
Coordinates   139591..140331 (+) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IT-MSSA53     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 134591..145331
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAO28_RS00840 (QAO28_00840) yhaM 135009..135950 (+) 942 WP_001244171.1 3'-5' exoribonuclease YhaM -
  QAO28_RS00845 (QAO28_00845) - 136071..137033 (-) 963 WP_000782121.1 foldase protein PrsA -
  QAO28_RS00850 (QAO28_00850) - 137238..137795 (-) 558 WP_000477957.1 DUF3267 domain-containing protein -
  QAO28_RS00855 (QAO28_00855) - 138528..138893 (-) 366 WP_000648118.1 YtxH domain-containing protein -
  QAO28_RS00860 (QAO28_00860) - 139035..139457 (-) 423 WP_045176861.1 HIT family protein -
  QAO28_RS00865 (QAO28_00865) pptA 139591..140331 (+) 741 WP_000216874.1 ABC transporter ATP-binding protein EcsA Regulator
  QAO28_RS00870 (QAO28_00870) ecsB 140324..141547 (+) 1224 WP_001245769.1 ABC transporter permease EcsB -
  QAO28_RS00875 (QAO28_00875) traP 141671..142174 (-) 504 WP_000737976.1 signal transduction protein TRAP -
  QAO28_RS00880 (QAO28_00880) - 142337..142447 (+) 111 WP_001790154.1 hypothetical protein -
  QAO28_RS00885 (QAO28_00885) hemE 142437..143474 (+) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  QAO28_RS00890 (QAO28_00890) hemH 143532..144455 (+) 924 WP_000162881.1 ferrochelatase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=746783 QAO28_RS00865 WP_000216874.1 139591..140331(+) (pptA) [Staphylococcus aureus strain IT-MSSA53]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=746783 QAO28_RS00865 WP_000216874.1 139591..140331(+) (pptA) [Staphylococcus aureus strain IT-MSSA53]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCTCCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTACTGTGATCGTTTTATCATACTTGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545