Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | F6Y15_RS13750 | Genome accession | NZ_AP020313 |
| Coordinates | 2718168..2718563 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain KUH140046 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2713168..2723563
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F6Y15_RS13720 (KUH140046_2547) | - | 2714426..2714830 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| F6Y15_RS13725 | - | 2715168..2715260 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| F6Y15_RS13730 (KUH140046_2548) | - | 2715392..2715625 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| F6Y15_RS13735 (KUH140046_2549) | murA | 2715736..2717001 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| F6Y15_RS13740 (KUH140046_2550) | fabZ | 2717035..2717475 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| F6Y15_RS13745 (KUH140046_2551) | - | 2717534..2717974 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| F6Y15_RS13750 (KUH140046_2552) | ssb | 2718168..2718563 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| F6Y15_RS13755 (KUH140046_2553) | sceD | 2718952..2719647 (+) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| F6Y15_RS13760 (KUH140046_2554) | tenA | 2720033..2720722 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| F6Y15_RS13765 (KUH140046_2555) | thiD | 2720715..2721545 (+) | 831 | WP_000594959.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| F6Y15_RS13770 (KUH140046_2556) | thiM | 2721529..2722320 (+) | 792 | WP_001108479.1 | hydroxyethylthiazole kinase | - |
| F6Y15_RS13775 (KUH140046_2557) | thiE | 2722322..2722963 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=74653 F6Y15_RS13750 WP_000932694.1 2718168..2718563(+) (ssb) [Staphylococcus aureus strain KUH140046]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=74653 F6Y15_RS13750 WP_000932694.1 2718168..2718563(+) (ssb) [Staphylococcus aureus strain KUH140046]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |