Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   QAO43_RS09630 Genome accession   NZ_CP123082
Coordinates   1934688..1935488 (-) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain SW-MRSA58     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1929688..1940488
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAO43_RS09615 (QAO43_09650) - 1929718..1930974 (-) 1257 WP_000566670.1 MrcB family domain-containing protein -
  QAO43_RS09620 (QAO43_09655) rlmH 1931296..1931775 (-) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  QAO43_RS09625 (QAO43_09660) adsA 1932143..1934461 (-) 2319 WP_000645787.1 LPXTG-anchored adenosine synthase AdsA -
  QAO43_RS09630 (QAO43_09665) vicX 1934688..1935488 (-) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  QAO43_RS09635 (QAO43_09670) - 1935877..1936665 (-) 789 WP_001104165.1 two-component system regulatory protein YycI -
  QAO43_RS09640 (QAO43_09675) yycH 1936666..1938000 (-) 1335 WP_001060140.1 two-component system activity regulator YycH -
  QAO43_RS09645 (QAO43_09680) walK 1937993..1939819 (-) 1827 WP_015445685.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=745951 QAO43_RS09630 WP_000088649.1 1934688..1935488(-) (vicX) [Staphylococcus aureus strain SW-MRSA58]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=745951 QAO43_RS09630 WP_000088649.1 1934688..1935488(-) (vicX) [Staphylococcus aureus strain SW-MRSA58]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGATGTGATTACAGGTAACACGA
AACGTATTTACCTATCGCATTTATCACAAGACAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474