Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | F6Y13_RS02525 | Genome accession | NZ_AP020311 |
| Coordinates | 461827..462126 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain KUH140013 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 456827..467126
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F6Y13_RS02485 | - | 456888..457091 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| F6Y13_RS02490 (KUH140013_0450) | - | 457088..458074 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| F6Y13_RS02495 (KUH140013_0451) | - | 458074..458403 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| F6Y13_RS02500 (KUH140013_0452) | - | 458400..459023 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| F6Y13_RS02505 (KUH140013_0453) | comGA | 459075..460049 (+) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| F6Y13_RS02510 (KUH140013_0454) | comGB | 460021..461091 (+) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| F6Y13_RS02515 (KUH140013_0455) | comGC | 461105..461416 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| F6Y13_RS02520 (KUH140013_0456) | comGD | 461394..461840 (+) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| F6Y13_RS02525 (KUH140013_0457) | comGE | 461827..462126 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| F6Y13_RS02530 (KUH140013_0458) | comGF | 462044..462541 (+) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| F6Y13_RS02535 | - | 462638..462784 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| F6Y13_RS02540 (KUH140013_0459) | - | 462774..463298 (+) | 525 | WP_001015117.1 | shikimate kinase | - |
| F6Y13_RS02545 (KUH140013_0460) | gcvT | 463457..464548 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| F6Y13_RS02550 (KUH140013_0461) | gcvPA | 464568..465914 (+) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=74585 F6Y13_RS02525 WP_000844413.1 461827..462126(+) (comGE) [Staphylococcus aureus strain KUH140013]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=74585 F6Y13_RS02525 WP_000844413.1 461827..462126(+) (comGE) [Staphylococcus aureus strain KUH140013]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |