Detailed information    

insolico Bioinformatically predicted

Overview


Name   cinA   Type   Machinery gene
Locus tag   QAY76_RS03725 Genome accession   NZ_CP123072
Coordinates   725690..726841 (-) Length   383 a.a.
NCBI ID   WP_000020363.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SW-MSSA62     
Function   unknown (predicted from homology)   
Unclear

Genomic Context


Location: 720690..731841
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAY76_RS03705 (QAY76_03695) - 721086..721883 (-) 798 WP_001222105.1 TIGR00282 family metallophosphoesterase -
  QAY76_RS03710 (QAY76_03700) - 722057..722272 (+) 216 WP_000026308.1 hypothetical protein -
  QAY76_RS03715 (QAY76_03705) rny 722569..724128 (-) 1560 WP_001050913.1 ribonuclease Y -
  QAY76_RS03720 (QAY76_03710) recA 724482..725525 (-) 1044 WP_000368166.1 recombinase RecA Machinery gene
  QAY76_RS03725 (QAY76_03715) cinA 725690..726841 (-) 1152 WP_000020363.1 CinA family nicotinamide mononucleotide deamidase-related protein Machinery gene
  QAY76_RS03730 (QAY76_03720) pgsA 727066..727644 (-) 579 WP_001025093.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  QAY76_RS03735 (QAY76_03725) - 727678..728070 (-) 393 WP_000859443.1 helix-turn-helix domain-containing protein -
  QAY76_RS03740 (QAY76_03730) - 728089..728916 (-) 828 WP_000214890.1 YmfK family protein -
  QAY76_RS03745 (QAY76_03735) ymfI 729021..729725 (-) 705 WP_000646227.1 elongation factor P 5-aminopentanone reductase -
  QAY76_RS03750 (QAY76_03740) yfmH 729725..731011 (-) 1287 WP_000664766.1 EF-P 5-aminopentanol modification-associated protein YfmH -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 43233.53 Da        Isoelectric Point: 6.1914

>NTDB_id=745574 QAY76_RS03725 WP_000020363.1 725690..726841(-) (cinA) [Staphylococcus aureus strain SW-MSSA62]
MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGDNKKRLESSVRHALEKYDTVILTGGLGPTKDDLTKHT
VAQIVGKDLVIDEPSLKYIESYFEEQGQEMTPNNKQQALVIEGSTVLTNHHGMAPGMMVNFENKQIILLPGPPKEMQPMV
KNELLSHFINHNRIIHSELLRFAGIGESKVETILIDLIDKQTNPTIAPLAGSHEVYIRLTANADSKEQAQSLIQPVKQEI
LDRIGEYYYGSDDTLIEQAVIKKIHEPFVIYDGITNGALYHRLKEVDLNDVLKGMINHNENLVDINKPIEQQLKDAVQFV
NKLFNVSSAIILLEYDGVVHIGYDNNFEFKTEQFKMSKSRNLLKNRSQNYALIRLLNWLRTTN

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=745574 QAY76_RS03725 WP_000020363.1 725690..726841(-) (cinA) [Staphylococcus aureus strain SW-MSSA62]
ATGTCAATTGCCATTATTGCTGTAGGCTCAGAACTATTGCTAGGTCAAATCGCTAATACCAACGGACAATTTCTATCTAA
AGTATTTAATGAAATTGGACAAAATGTATTAGAACATAAAGTTATTGGAGATAATAAAAAACGTTTAGAATCAAGTGTAC
GTCATGCGCTAGAAAAATATGATACTGTTATTTTAACAGGTGGCTTAGGTCCTACGAAAGATGACTTAACGAAGCATACA
GTGGCCCAGATTGTTGGTAAAGATTTAGTTATTGATGAGCCTTCTTTAAAATATATTGAAAGCTATTTTGAGGAACAAGG
ACAAGAAATGACACCTAATAATAAACAACAGGCTTTAGTAATTGAAGGTTCAACTGTATTAACAAATCATCATGGCATGG
CTCCAGGAATGATGGTGAATTTTGAAAACAAACAAATTATTTTATTACCAGGTCCACCGAAAGAAATGCAACCAATGGTG
AAAAATGAATTGTTGTCACATTTTATAAACCATAATCGAATTATACATTCTGAACTATTAAGATTTGCGGGAATAGGTGA
ATCTAAAGTAGAAACAATATTAATAGATCTTATCGATAAACAGACTAATCCTACGATTGCGCCTTTGGCGGGAAGTCATG
AAGTATATATTAGATTGACTGCAAATGCCGACTCAAAAGAACAAGCACAATCATTGATTCAACCTGTTAAACAAGAAATT
CTTGATCGTATTGGAGAATATTATTATGGTTCAGATGACACATTAATTGAGCAAGCTGTAATAAAGAAAATTCATGAACC
TTTTGTAATATATGATGGTATTACTAATGGTGCTTTATATCATCGATTGAAAGAAGTGGATTTAAACGATGTTCTAAAGG
GTATGATTAATCACAATGAAAACCTTGTTGATATTAATAAACCTATTGAGCAGCAATTAAAAGATGCAGTGCAATTTGTT
AATAAATTGTTTAATGTGTCATCAGCAATTATTCTATTAGAGTATGATGGTGTAGTCCATATAGGCTATGATAATAACTT
TGAATTTAAAACTGAGCAATTTAAAATGTCTAAATCTAGAAATTTATTAAAGAACAGAAGTCAAAATTATGCGCTCATAA
GATTATTAAATTGGCTTAGAACAACAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

40.146

100

0.431