Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QAY76_RS00905 Genome accession   NZ_CP123072
Coordinates   147785..148525 (+) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SW-MSSA62     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 142785..153525
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAY76_RS00880 (QAY76_00875) yhaM 143204..144145 (+) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -
  QAY76_RS00885 (QAY76_00880) - 144266..145228 (-) 963 WP_000782121.1 foldase protein PrsA -
  QAY76_RS00890 (QAY76_00885) - 145433..145990 (-) 558 WP_000477960.1 DUF3267 domain-containing protein -
  QAY76_RS00895 (QAY76_00890) - 146722..147087 (-) 366 WP_000648118.1 YtxH domain-containing protein -
  QAY76_RS00900 (QAY76_00895) - 147229..147651 (-) 423 WP_000004986.1 HIT family protein -
  QAY76_RS00905 (QAY76_00900) pptA 147785..148525 (+) 741 WP_000216874.1 ABC transporter ATP-binding protein EcsA Regulator
  QAY76_RS00910 (QAY76_00905) ecsB 148518..149741 (+) 1224 WP_000551839.1 ABC transporter permease EcsB -
  QAY76_RS00915 (QAY76_00910) traP 149865..150368 (-) 504 WP_000737978.1 signal transduction protein TRAP -
  QAY76_RS00920 (QAY76_00915) - 150531..150641 (+) 111 WP_001790154.1 hypothetical protein -
  QAY76_RS00925 (QAY76_00920) hemE 150631..151668 (+) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  QAY76_RS00930 (QAY76_00925) hemH 151726..152649 (+) 924 WP_000162881.1 ferrochelatase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=745542 QAY76_RS00905 WP_000216874.1 147785..148525(+) (pptA) [Staphylococcus aureus strain SW-MSSA62]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=745542 QAY76_RS00905 WP_000216874.1 147785..148525(+) (pptA) [Staphylococcus aureus strain SW-MSSA62]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545