Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   QAO32_RS03620 Genome accession   NZ_CP123070
Coordinates   700178..700801 (+) Length   207 a.a.
NCBI ID   WP_411905333.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SW-MSSA64     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 695178..705801
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAO32_RS03590 (QAO32_03590) - 696152..696619 (-) 468 WP_000966144.1 CcdC family protein -
  QAO32_RS03595 (QAO32_03595) - 696713..696811 (-) 99 WP_001789897.1 hypothetical protein -
  QAO32_RS03600 (QAO32_03600) - 696798..697040 (-) 243 WP_000246909.1 YneF family protein -
  QAO32_RS03605 (QAO32_03605) recP/tkt 697318..699306 (-) 1989 WP_000481440.1 transketolase Machinery gene
  QAO32_RS03610 (QAO32_03610) - 699427..699666 (-) 240 WP_000071351.1 DUF896 domain-containing protein -
  QAO32_RS03615 (QAO32_03615) sosA 699802..700035 (-) 234 WP_000499648.1 DNA damage-induced cell division inhibitor SosA -
  QAO32_RS03620 (QAO32_03620) dinR/lexA 700178..700801 (+) 624 WP_411905333.1 transcriptional repressor LexA Regulator
  QAO32_RS03625 (QAO32_03625) - 701181..702197 (-) 1017 WP_169428106.1 CAP domain-containing protein -
  QAO32_RS03630 (QAO32_03630) guaC 702219..703196 (-) 978 WP_000688134.1 GMP reductase -
  QAO32_RS03635 (QAO32_03635) rpsN 703353..703622 (-) 270 WP_001085655.1 30S ribosomal protein S14 -
  QAO32_RS03640 (QAO32_03640) rpmG 704075..704224 (-) 150 WP_001265708.1 50S ribosomal protein L33 -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23345.57 Da        Isoelectric Point: 4.8811

>NTDB_id=745480 QAO32_RS03620 WP_411905333.1 700178..700801(+) (dinR/lexA) [Staphylococcus aureus strain SW-MSSA64]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGLPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=745480 QAO32_RS03620 WP_411905333.1 700178..700801(+) (dinR/lexA) [Staphylococcus aureus strain SW-MSSA64]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGAGAAATTGGAGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGCGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTCTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAGGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(86-201)

LexA DNA binding domain (LexA_DNA_bind)

(1-65)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657