Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   SAGCMC97051_RS03210 Genome accession   NZ_AP020310
Coordinates   539002..540075 (+) Length   357 a.a.
NCBI ID   WP_000796095.1    Uniprot ID   A0A0E1EG10
Organism   Streptococcus agalactiae strain GCMC97051     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 534002..545075
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAGCMC97051_RS03180 (SAGCMC97051_05470) - 534895..535959 (+) 1065 WP_000021302.1 MmcQ/YjbR family DNA-binding protein -
  SAGCMC97051_RS03185 (SAGCMC97051_05480) asnA 536073..537065 (+) 993 WP_000748011.1 aspartate--ammonia ligase -
  SAGCMC97051_RS03190 (SAGCMC97051_05490) - 537110..537559 (-) 450 WP_000592263.1 thiol reductase thioredoxin -
  SAGCMC97051_RS03195 (SAGCMC97051_05500) rsmD 537689..538228 (+) 540 WP_001266829.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  SAGCMC97051_RS03200 (SAGCMC97051_05510) - 538240..538530 (+) 291 WP_000384889.1 hypothetical protein -
  SAGCMC97051_RS03205 (SAGCMC97051_05520) coaD 538527..539012 (+) 486 WP_000161892.1 pantetheine-phosphate adenylyltransferase -
  SAGCMC97051_RS03210 (SAGCMC97051_05530) sepM 539002..540075 (+) 1074 WP_000796095.1 SepM family pheromone-processing serine protease Regulator
  SAGCMC97051_RS03215 - 540150..541473 (+) 1324 Protein_549 bifunctional metallophosphatase/5'-nucleotidase -
  SAGCMC97051_RS03220 (SAGCMC97051_05560) - 541542..542120 (+) 579 WP_001224500.1 YutD family protein -
  SAGCMC97051_RS03225 (SAGCMC97051_05570) rlmN 542171..543277 (+) 1107 WP_001124990.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  SAGCMC97051_RS03230 (SAGCMC97051_05580) - 543277..543792 (+) 516 WP_000919802.1 VanZ family protein -

Sequence


Protein


Download         Length: 357 a.a.        Molecular weight: 39199.43 Da        Isoelectric Point: 10.4385

>NTDB_id=74537 SAGCMC97051_RS03210 WP_000796095.1 539002..540075(+) (sepM) [Streptococcus agalactiae strain GCMC97051]
MKNRDPKRKHKSLLGLLKWWIIGFAFLLLVLASLVVRLPYYLEMPGGAYDIRSVLKVNKKADKAKGSYNFVAVSVSQATP
AQVLYAWLTPFTELSSKEETTGGFSNDDYLRINQFYMETSQNESIYQALKLANKQVSLTYKGVYVLNLAKNSTFKDRLHL
ADTVTGVNGKSFKNSSQLIKYVAALHLGDKVKVQYTSQGKKKESVGKVIKLSNGKNGIGIGLTDHTEVLSDVPVDFNTEG
VGGPSAGLMFTLAIYDQLVKEDLRKGRKIAGTGTIEQNGHVGDIGGAGLKVVSAAKKGMDIFFVPNNPIDKNAKKGKTKV
QTNYQEAKAAAKRLGTKMKIVPVQNVQQAIDYLKKTK

Nucleotide


Download         Length: 1074 bp        

>NTDB_id=74537 SAGCMC97051_RS03210 WP_000796095.1 539002..540075(+) (sepM) [Streptococcus agalactiae strain GCMC97051]
GTGAAGAATAGAGATCCAAAAAGAAAACATAAAAGTTTACTAGGTCTGCTTAAATGGTGGATTATAGGTTTTGCTTTTTT
ATTGTTAGTATTAGCAAGCCTTGTAGTGAGACTACCTTATTATTTGGAAATGCCAGGTGGAGCTTATGATATCCGTTCGG
TATTGAAAGTGAATAAAAAGGCTGATAAAGCTAAGGGTTCGTACAATTTTGTAGCGGTATCTGTCAGTCAAGCAACGCCA
GCTCAGGTTCTTTATGCTTGGTTAACTCCTTTTACAGAATTATCTAGTAAAGAGGAGACAACAGGTGGCTTTAGTAATGA
CGATTATCTCAGAATTAATCAATTCTACATGGAGACTTCTCAAAATGAGTCCATCTATCAAGCTTTAAAGTTAGCTAATA
AGCAAGTATCTCTTACTTATAAAGGAGTTTATGTGCTTAACTTAGCTAAAAATTCGACATTTAAAGATAGATTACATTTA
GCTGATACAGTCACAGGAGTTAATGGCAAAAGTTTCAAAAATTCTTCTCAACTTATCAAATATGTTGCAGCTCTTCATCT
AGGTGATAAAGTAAAGGTACAATACACAAGTCAAGGTAAAAAGAAAGAATCAGTTGGTAAAGTTATTAAACTATCAAACG
GTAAAAATGGTATTGGTATCGGTTTGACAGACCATACAGAAGTATTATCTGATGTTCCTGTGGACTTTAATACTGAAGGT
GTTGGAGGACCAAGTGCAGGTTTAATGTTTACTTTAGCGATTTACGACCAATTGGTTAAAGAAGATTTACGTAAAGGACG
TAAGATTGCAGGTACTGGTACTATTGAGCAAAATGGGCATGTTGGCGATATTGGTGGAGCAGGTTTGAAAGTTGTTTCAG
CGGCTAAAAAAGGAATGGATATTTTCTTTGTTCCTAATAATCCGATCGATAAAAATGCTAAAAAAGGCAAAACAAAGGTT
CAGACGAATTATCAAGAGGCAAAAGCAGCAGCTAAGCGATTAGGTACGAAGATGAAAATTGTACCAGTTCAAAATGTTCA
GCAAGCTATTGATTATTTGAAAAAAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0E1EG10

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.322

94.958

0.658


Multiple sequence alignment