Detailed information NTG0744640

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: QBD03_RS06185
• Genome accession: NZ_CP122959
• Coordinates: 1278546..1279592 (-)
• Length: 348 a.a.
• NCBI ID: WP_280102551.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain HUP1
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 1273546..1284592

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QBD03_RS06160 (QBD03_06160)	rpsT	1273609..1273863 (+)	255	WP_011374767.1	30S ribosomal protein S20	-
QBD03_RS06165 (QBD03_06165)	holA	1273932..1274960 (-)	1029	WP_280102548.1	DNA polymerase III subunit delta	-
QBD03_RS06170 (QBD03_06170)	comEC	1274957..1277224 (-)	2268	WP_280102549.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
QBD03_RS06175 (QBD03_06175)	-	1277221..1277709 (-)	489	WP_011374770.1	ComE operon protein 2	-
QBD03_RS06180 (QBD03_06180)	comEA	1277767..1278474 (-)	708	WP_280102550.1	helix-hairpin-helix domain-containing protein	Machinery gene
QBD03_RS06185 (QBD03_06185)	sepM	1278546..1279592 (-)	1047	WP_280102551.1	SepM family pheromone-processing serine protease	Regulator
QBD03_RS06190 (QBD03_06190)	coaD	1279594..1280091 (-)	498	WP_025015732.1	pantetheine-phosphate adenylyltransferase	-
QBD03_RS06195 (QBD03_06195)	rsmD	1280104..1280658 (-)	555	WP_016265217.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
QBD03_RS06200 (QBD03_06200)	-	1280663..1280953 (-)	291	WP_016265218.1	YlbG family protein	-
QBD03_RS06205 (QBD03_06205)	-	1280977..1282065 (-)	1089	WP_280102552.1	CAP-associated domain-containing protein	-
QBD03_RS06210 (QBD03_06210)	-	1282076..1283263 (-)	1188	WP_280102553.1	FtsW/RodA/SpoVE family cell cycle protein	-
QBD03_RS06215 (QBD03_06215)	-	1283272..1283568 (-)	297	WP_112206198.1	DUF1507 family protein	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38126.84 Da
• Isoelectric Point: 9.2872

>NTDB_id=744640 QBD03_RS06185 WP_280102551.1 1278546..1279592(-) (sepM) [Latilactobacillus sakei strain HUP1]
MPKNKKLTKRLIVIVVLIIVAVVCLMPTGYYIEGAGTAENTSQYVKVDGKHDHQKGHFMLTTVGVRGPVTPLQLLLSKTQ
PFTEIESRDELMGNEDTEAYEQIQKYYMDSSINAAVEAAYKKADKAYHTKYLGVYVMSMLDNSTFEDDLAVGDTITAIDH
HQFKNANAFVKYVQGLKVGQKVTVSYDHGQKHQTATHRLIKLPGTHHPGLGITLTDHSKIETDIPVKIDAGDIGGPSAGL
MFTLQVYNQLTKQNLQKGRKIAGTGTMAADGTVGAIGGIDKKVLVASQEGATVFFAPNDPVTKAILKVDPDYQNNYTIAK
NAAKKIHTKMKIVPVKTLDDALTYLKNH

Nucleotide

• Length: 1047 bp

>NTDB_id=744640 QBD03_RS06185 WP_280102551.1 1278546..1279592(-) (sepM) [Latilactobacillus sakei strain HUP1]
ATGCCCAAAAATAAGAAACTGACAAAACGATTAATTGTAATTGTGGTTTTAATCATTGTTGCAGTTGTTTGTTTAATGCC
CACTGGCTATTATATTGAAGGTGCCGGGACCGCAGAAAATACCAGCCAATATGTTAAGGTCGACGGTAAACATGATCATC
AAAAAGGCCATTTTATGCTGACAACAGTTGGTGTCAGAGGCCCAGTAACACCATTGCAATTATTATTGTCCAAGACGCAA
CCTTTTACGGAAATTGAAAGTCGCGATGAACTAATGGGCAATGAAGATACCGAAGCTTACGAACAGATTCAAAAGTACTA
TATGGATAGTTCAATTAACGCTGCCGTTGAAGCCGCCTATAAAAAAGCTGATAAGGCCTACCATACGAAGTATCTGGGCG
TTTATGTGATGTCGATGTTAGACAACTCCACTTTTGAAGATGATTTAGCAGTCGGTGATACGATTACCGCGATTGATCAT
CATCAATTTAAAAATGCCAATGCTTTTGTAAAGTATGTCCAAGGTTTGAAAGTTGGTCAAAAGGTCACGGTTAGTTACGA
TCATGGTCAAAAACATCAAACGGCAACGCATCGTTTGATTAAATTACCAGGGACGCATCATCCGGGCCTCGGGATTACGT
TAACCGATCACTCTAAGATTGAGACTGATATTCCGGTTAAAATTGATGCCGGTGATATTGGGGGGCCATCTGCAGGCTTG
ATGTTTACGTTGCAAGTTTATAATCAATTAACGAAGCAAAATCTCCAAAAGGGTCGTAAAATTGCGGGGACCGGCACAAT
GGCTGCTGATGGTACTGTAGGTGCTATTGGTGGGATTGATAAAAAGGTACTGGTCGCTAGTCAAGAAGGCGCAACGGTCT
TTTTTGCACCGAATGATCCTGTAACAAAGGCAATTTTAAAGGTTGATCCTGATTATCAAAATAATTATACAATCGCTAAA
AATGCCGCTAAAAAAATTCATACTAAGATGAAGATCGTACCGGTCAAAACCTTAGATGATGCGTTAACTTATTTGAAAAA
CCATTAA

Domains

Predicted by InterProScan.

• PDZ domain (PDZ_2) (131-196)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (221-310)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	43.966	100	0.44