Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   FYK59_RS05500 Genome accession   NZ_AP019853
Coordinates   1071617..1072078 (+) Length   153 a.a.
NCBI ID   WP_003688187.1    Uniprot ID   A0AA44U815
Organism   Neisseria gonorrhoeae strain SS3160     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1066617..1077078
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FYK59_RS05475 (NGSS3160_10750) - 1066650..1067864 (-) 1215 WP_003690983.1 pyridoxal phosphate-dependent aminotransferase -
  FYK59_RS05480 (NGSS3160_10760) - 1067953..1068162 (-) 210 WP_003688192.1 tautomerase family protein -
  FYK59_RS05485 (NGSS3160_10770) - 1068354..1069160 (+) 807 WP_003690982.1 DUF4198 domain-containing protein -
  FYK59_RS12575 (NGSS3160_10790) - 1069220..1070439 (-) 1220 Protein_1086 Glu/Leu/Phe/Val family dehydrogenase -
  FYK59_RS05495 (NGSS3160_10810) - 1070834..1071544 (+) 711 WP_003690977.1 phosphoglycolate phosphatase -
  FYK59_RS05500 (NGSS3160_10820) recX 1071617..1072078 (+) 462 WP_003688187.1 recombination regulator RecX Regulator
  FYK59_RS05505 (NGSS3160_10830) - 1072152..1072313 (+) 162 WP_010358395.1 hypothetical protein -
  FYK59_RS05510 (NGSS3160_10840) - 1072466..1072948 (+) 483 WP_003688183.1 acyl-CoA thioesterase -
  FYK59_RS05515 (NGSS3160_10850) - 1073346..1074359 (-) 1014 WP_025455948.1 peptidoglycan DD-metalloendopeptidase family protein -
  FYK59_RS05520 (NGSS3160_10860) surE 1074461..1075207 (-) 747 WP_126356676.1 5'/3'-nucleotidase SurE -
  FYK59_RS05525 (NGSS3160_10870) - 1075224..1076780 (-) 1557 WP_003690972.1 TerC family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17745.13 Da        Isoelectric Point: 10.4361

>NTDB_id=74441 FYK59_RS05500 WP_003688187.1 1071617..1072078(+) (recX) [Neisseria gonorrhoeae strain SS3160]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEKTSRNLLPDRSSEKQAAIAVLRKKFKHPAANLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDSC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=74441 FYK59_RS05500 WP_003688187.1 1071617..1072078(+) (recX) [Neisseria gonorrhoeae strain SS3160]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTACGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAAAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAGCAAGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACATCCCGCCGCCAACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGTTTTGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACAGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

100

100

1

Multiple sequence alignment