Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   BsBEST3145_RS21510 Genome accession   NZ_AP024625
Coordinates   4125625..4126419 (-) Length   264 a.a.
NCBI ID   WP_003242676.1    Uniprot ID   C0SP91
Organism   Bacillus subtilis strain BEST3109     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4120625..4131419
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BsBEST3145_RS21485 (BsBEST3109_41550) rocD 4121075..4122280 (-) 1206 WP_003242970.1 ornithine aminotransferase -
  BsBEST3145_RS21490 (BsBEST3109_41560) rocR 4122521..4123906 (+) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  BsBEST3145_RS21495 (BsBEST3109_41570) - 4123888..4124076 (-) 189 Protein_4205 ATP-binding protein -
  BsBEST3145_RS21500 (BsBEST3109_41580) - 4124193..4124321 (-) 129 WP_003242634.1 hypothetical protein -
  BsBEST3145_RS21505 (BsBEST3109_41590) htrA 4124341..4125543 (-) 1203 WP_009969578.1 serine protease HtrC Regulator
  BsBEST3145_RS21510 (BsBEST3109_41600) vicX 4125625..4126419 (-) 795 WP_003242676.1 MBL fold metallo-hydrolase Regulator
  BsBEST3145_RS21515 (BsBEST3109_41610) walI 4126441..4127283 (-) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  BsBEST3145_RS21520 (BsBEST3109_41620) walH 4127270..4128637 (-) 1368 WP_003242498.1 WalRK two-component regulatory system regulator WalH -
  BsBEST3145_RS21525 (BsBEST3109_41630) walK 4128627..4130462 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  BsBEST3145_RS21530 (BsBEST3109_41640) walR 4130470..4131177 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29256.25 Da        Isoelectric Point: 5.8036

>NTDB_id=74261 BsBEST3145_RS21510 WP_003242676.1 4125625..4126419(-) (vicX) [Bacillus subtilis strain BEST3109]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYSGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=74261 BsBEST3145_RS21510 WP_003242676.1 4125625..4126419(-) (vicX) [Bacillus subtilis strain BEST3109]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAGCGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0SP91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53

Multiple sequence alignment