Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   HZ311_RS06675 Genome accession   NZ_AP019810
Coordinates   1401735..1402775 (-) Length   346 a.a.
NCBI ID   WP_178946547.1    Uniprot ID   A0AAI8R966
Organism   Enterococcus mundtii strain 15-1A     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1396735..1407775
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HZ311_RS06655 (EM151A_1371) - 1397050..1397403 (-) 354 WP_034691573.1 hypothetical protein -
  HZ311_RS06660 (EM151A_1372) - 1397412..1398152 (-) 741 WP_010734080.1 hypothetical protein -
  HZ311_RS06665 (EM151A_1374) - 1398682..1399650 (-) 969 WP_137072960.1 hypothetical protein -
  HZ311_RS06670 (EM151A_1375) rny 1399890..1401446 (-) 1557 WP_010734077.1 ribonuclease Y -
  HZ311_RS06675 (EM151A_1376) recA 1401735..1402775 (-) 1041 WP_178946547.1 recombinase RecA Machinery gene
  HZ311_RS06680 (EM151A_1377) cinA 1402881..1404125 (-) 1245 WP_023520517.1 competence/damage-inducible protein A Machinery gene
  HZ311_RS06685 (EM151A_1379) pgsA 1404352..1404930 (-) 579 WP_178946548.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  HZ311_RS06690 (EM151A_1380) - 1405102..1405992 (-) 891 WP_010734073.1 helix-turn-helix domain-containing protein -
  HZ311_RS06695 (EM151A_1381) yfmH 1406288..1407577 (-) 1290 WP_023520520.1 EF-P 5-aminopentanol modification-associated protein YfmH -

Sequence

Protein


Download         Length: 346 a.a.        Molecular weight: 37256.58 Da        Isoelectric Point: 4.8182

>NTDB_id=74242 HZ311_RS06675 WP_178946547.1 1401735..1402775(-) (recA) [Enterococcus mundtii strain 15-1A]
MADDRKAALDAALKKIEKNYGKGSIMKLGEKIDQQISTIPSGSLALDVALGIGGYPRGRIIEVYGPESSGKTTVALHAIA
EVQKNGGTAAFIDAEHALDPQYAQKLGVNIDELLLSQPDTGEQGLEIADALVSSGAVDIVVIDSVAALVPRAEIDGEMGD
SHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPEITPGGRALKFYATIRLEVRRAEQLKQGTDIVGNR
TKIKVVKNKVAPPFKIAEVDVMYGLGISQEGELLDMAVEKDIVDKSGAWYSYKEDRIGQGRENAKIYMSNHPEMMAEVST
LVRAAYGIGEPVDAPEEAQEELPLDE

Nucleotide


Download         Length: 1041 bp        

>NTDB_id=74242 HZ311_RS06675 WP_178946547.1 1401735..1402775(-) (recA) [Enterococcus mundtii strain 15-1A]
TTGGCAGATGATCGTAAAGCAGCCTTAGATGCTGCATTGAAAAAAATTGAAAAGAACTATGGGAAAGGTTCGATCATGAA
ACTGGGCGAAAAAATCGACCAACAAATCTCGACAATTCCAAGTGGTTCTCTTGCACTAGATGTTGCTTTAGGGATAGGTG
GCTATCCTCGTGGACGGATCATTGAAGTCTACGGTCCAGAAAGTTCAGGTAAAACAACGGTTGCACTTCATGCAATCGCA
GAAGTCCAAAAAAATGGTGGGACTGCCGCCTTTATTGATGCGGAACATGCCTTAGATCCACAATATGCCCAAAAATTAGG
GGTAAATATCGATGAATTACTCCTTTCTCAACCGGATACAGGAGAACAAGGATTAGAAATCGCTGATGCTTTAGTATCAA
GTGGTGCAGTAGATATTGTCGTTATCGACTCAGTAGCAGCTTTAGTACCACGTGCAGAGATCGACGGTGAGATGGGTGAC
TCACACGTAGGGTTACAAGCTCGTTTGATGTCTCAAGCCTTACGTAAACTGTCAGGATCGATCAACAAAACAAAAACGAT
CGCGATTTTCATCAACCAAATTCGTGAAAAAGTTGGCGTGATGTTCGGTAATCCAGAAATCACACCAGGAGGACGTGCGC
TGAAGTTCTATGCAACGATCCGTTTGGAAGTACGTCGTGCTGAACAATTGAAACAAGGAACGGACATTGTCGGTAACCGT
ACAAAGATCAAAGTCGTAAAAAATAAAGTAGCGCCACCATTCAAAATCGCTGAAGTCGATGTCATGTATGGCTTAGGTAT
CTCTCAAGAAGGCGAGCTATTGGATATGGCAGTTGAAAAAGATATCGTTGACAAGAGTGGTGCATGGTATTCTTACAAAG
AAGATCGCATTGGTCAAGGTCGTGAAAACGCGAAAATCTATATGTCAAATCATCCAGAGATGATGGCTGAAGTATCTACA
TTAGTGCGTGCAGCTTATGGCATCGGTGAACCAGTTGATGCACCAGAAGAAGCACAAGAAGAATTACCACTAGATGAATA
A

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(8-268)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Latilactobacillus sakei subsp. sakei 23K

78.488

99.422

0.78
  recA Bacillus subtilis subsp. subtilis str. 168

79.385

93.931

0.746
  recA Streptococcus pneumoniae D39

67.778

100

0.705
  recA Streptococcus pneumoniae R6

67.778

100

0.705
  recA Streptococcus pneumoniae TIGR4

67.778

100

0.705
  recA Streptococcus pneumoniae Rx1

67.778

100

0.705
  recA Streptococcus mitis SK321

68.805

99.133

0.682
  recA Streptococcus mitis NCTC 12261

70.517

95.087

0.671
  recA Streptococcus mutans UA159

67.055

99.133

0.665
  recA Streptococcus pyogenes NZ131

69.184

95.665

0.662
  recA Lactococcus lactis subsp. cremoris KW2

67.781

95.087

0.645
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

59.942

98.844

0.592
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

62.691

94.509

0.592
  recA Neisseria gonorrhoeae strain FA1090

61.398

95.087

0.584
  recA Neisseria gonorrhoeae MS11

61.398

95.087

0.584
  recA Neisseria gonorrhoeae MS11

61.398

95.087

0.584
  recA Ralstonia pseudosolanacearum GMI1000

61.846

93.931

0.581
  recA Acinetobacter baumannii D1279779

61.61

93.353

0.575
  recA Helicobacter pylori strain NCTC11637

57.895

98.844

0.572
  recA Helicobacter pylori 26695

57.895

98.844

0.572
  recA Vibrio cholerae strain A1552

61.3

93.353

0.572
  recA Vibrio cholerae O1 biovar El Tor strain E7946

61.3

93.353

0.572
  recA Acinetobacter baylyi ADP1

60.991

93.353

0.569
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

60.615

93.931

0.569
  recA Pseudomonas stutzeri DSM 10701

60.494

93.642

0.566
  recA Glaesserella parasuis strain SC1401

60.748

92.775

0.564

Multiple sequence alignment