Detailed information NTG0074160

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: TthHC11_RS02465
• Genome accession: NZ_AP019801
• Coordinates: 446258..447172 (-)
• Length: 304 a.a.
• NCBI ID: WP_011227933.1
• Uniprot ID: -
• Organism: Thermus thermophilus strain HC11
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 441258..452172

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TthHC11_RS02435 (TthHC11_04690)	hisH	441888..442484 (+)	597	WP_024119973.1	imidazole glycerol phosphate synthase subunit HisH	-
TthHC11_RS02440 (TthHC11_04700)	-	442455..443375 (-)	921	WP_143590505.1	carbohydrate kinase family protein	-
TthHC11_RS02445 (TthHC11_04710)	guaB	443520..445001 (+)	1482	WP_011227931.1	IMP dehydrogenase	-
TthHC11_RS02450 (TthHC11_04720)	-	444998..445228 (-)	231	WP_143590507.1	hypothetical protein	-
TthHC11_RS02455 (TthHC11_04730)	-	445269..445754 (+)	486	WP_011227932.1	hypothetical protein	-
TthHC11_RS02460 (TthHC11_04740)	-	445699..446124 (-)	426	WP_011172524.1	disulfide bond formation protein B	-
TthHC11_RS02465 (TthHC11_04750)	pilA	446258..447172 (-)	915	WP_011227933.1	signal recognition particle-docking protein FtsY	Machinery gene
TthHC11_RS02470 (TthHC11_04760)	-	447172..447612 (-)	441	WP_041443309.1	hypothetical protein	-
TthHC11_RS02475 (TthHC11_04770)	gltX	447629..449035 (-)	1407	WP_011172527.1	glutamate--tRNA ligase	-
TthHC11_RS02480 (TthHC11_04780)	lptB	449090..449818 (+)	729	WP_011172528.1	LPS export ABC transporter ATP-binding protein	-
TthHC11_RS11950 (TthHC11_04790)	-	449821..451164 (+)	1344	WP_011172529.1	DUF3084 domain-containing protein	-
TthHC11_RS11955	prmC	451066..451959 (-)	894	Protein_474	peptide chain release factor N(5)-glutamine methyltransferase	-

Sequence

Protein

• Length: 304 a.a.
• Molecular weight: 32721.17 Da
• Isoelectric Point: 9.7124

>NTDB_id=74160 TthHC11_RS02465 WP_011227933.1 446258..447172(-) (pilA) [Thermus thermophilus strain HC11]
MGLFDRLRAGLAKTRERLLKAIPWGGDPEEVLEELEMALLAADVGVAATEELLKEVRASGRRDLKEVVKEKLVQMLEPDE
RRATLRKLGFRPQKLRPVEPQGHVVMVVGVNGVGKTTTIAKLGRLYQGLGKKVLFCAGDTFRAAGGAQLAEWGKRLGIPV
IQGPEGADPAALAFDAAKARRARGLDLLFVDTAGRLHTKQGLMEELKKVKRAIAKADPGEPGEVWLVLDAVTGQNGLEQA
KRFHEAVGLTGVIVTKLDGTAKGGVLVPIVRTLKVPIRFIGVGEGPDDLQPFDAEAFVEALLEA

Nucleotide

• Length: 915 bp

>NTDB_id=74160 TthHC11_RS02465 WP_011227933.1 446258..447172(-) (pilA) [Thermus thermophilus strain HC11]
ATGGGCCTCTTTGACCGGCTCAGGGCGGGCCTCGCCAAGACCCGGGAAAGGCTCCTCAAGGCCATCCCCTGGGGCGGCGA
CCCCGAGGAGGTCCTGGAGGAGCTGGAGATGGCCCTCCTCGCCGCCGACGTGGGGGTGGCGGCCACGGAGGAGCTCCTCA
AGGAGGTGCGGGCCTCGGGGCGGCGGGACCTGAAGGAGGTGGTGAAGGAGAAGCTCGTCCAGATGCTGGAGCCGGACGAG
CGGCGGGCCACGCTGAGGAAGCTCGGCTTCCGTCCCCAGAAGCTCCGCCCCGTGGAGCCTCAGGGGCACGTGGTGATGGT
GGTGGGGGTGAACGGGGTGGGCAAGACCACCACCATCGCCAAGCTGGGCCGCCTCTACCAGGGCCTCGGCAAGAAGGTCC
TCTTCTGCGCCGGGGACACCTTCCGCGCCGCGGGGGGAGCCCAGCTCGCGGAGTGGGGGAAGCGCCTCGGGATCCCGGTG
ATCCAGGGCCCCGAGGGGGCGGACCCCGCCGCCCTCGCCTTTGACGCCGCCAAGGCCCGAAGGGCGCGGGGCCTGGACCT
CCTCTTCGTGGACACCGCAGGCCGCCTCCACACCAAGCAGGGCCTCATGGAGGAGCTCAAGAAGGTGAAGCGGGCCATCG
CCAAGGCGGACCCCGGGGAGCCGGGGGAGGTGTGGCTCGTGCTGGACGCCGTCACCGGGCAGAACGGCCTGGAGCAGGCC
AAGCGCTTCCACGAGGCCGTGGGCCTCACCGGGGTCATCGTCACCAAGCTGGACGGGACGGCCAAGGGCGGGGTCCTGGT
CCCCATCGTCCGCACCCTAAAGGTGCCCATCCGCTTCATCGGCGTGGGAGAAGGCCCGGACGACCTCCAGCCCTTTGACG
CCGAGGCCTTCGTGGAGGCCCTCCTCGAGGCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (29-65)

• SRP54-type protein, GTPase domain (SRP54) (103-302)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.726	100	0.503