Detailed information NTG0741244

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QDX83_RS24055
• Genome accession: NZ_CP122600
• Coordinates: 4879375..4880400 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain ETEC6333
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4874375..4885400

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QDX83_RS24035 (QDX83_24035)	metJ	4875560..4875877 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
QDX83_RS24040 (QDX83_24040)	yiiX	4875937..4876545 (+)	609	WP_048969931.1	YiiX family permuted papain-like enzyme	-
QDX83_RS24045 (QDX83_24045)	rpmE	4876606..4876818 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
QDX83_RS24050 (QDX83_24050)	priA	4877021..4879219 (+)	2199	WP_063085506.1	primosomal protein N'	Machinery gene
QDX83_RS24055 (QDX83_24055)	cytR	4879375..4880400 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
QDX83_RS24060 (QDX83_24060)	ftsN	4880492..4881451 (+)	960	WP_000068828.1	cell division protein FtsN	-
QDX83_RS24065 (QDX83_24065)	hslV	4881544..4882074 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QDX83_RS24070 (QDX83_24070)	hslU	4882084..4883415 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
QDX83_RS24075 (QDX83_24075)	menA	4883482..4884408 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QDX83_RS24080 (QDX83_24080)	rraA	4884501..4884986 (+)	486	WP_001545067.1	ribonuclease E activity regulator RraA	-
QDX83_RS24085 (QDX83_24085)	zapB	4885071..4885316 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=741244 QDX83_RS24055 WP_000644904.1 4879375..4880400(+) (cytR) [Escherichia coli strain ETEC6333]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=741244 QDX83_RS24055 WP_000644904.1 4879375..4880400(+) (cytR) [Escherichia coli strain ETEC6333]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTTTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCTCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628