Detailed information NTG0740923

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QC806_RS22080
• Genome accession: NZ_CP122507
• Coordinates: 4512807..4513832 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain W444
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4507807..4518832

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QC806_RS22060	metJ	4508868..4509185 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
QC806_RS22065	yiiX	4509369..4509977 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
QC806_RS22070	rpmE	4510038..4510250 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
QC806_RS22075	priA	4510453..4512651 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
QC806_RS22080	cytR	4512807..4513832 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
QC806_RS22085	ftsN	4513924..4514883 (+)	960	WP_000068828.1	cell division protein FtsN	-
QC806_RS22090	hslV	4514976..4515506 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QC806_RS22095	hslU	4515516..4516847 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
QC806_RS22100	menA	4516914..4517840 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QC806_RS22105	rraA	4517933..4518418 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
QC806_RS22110	zapB	4518503..4518748 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=740923 QC806_RS22080 WP_000644904.1 4512807..4513832(+) (cytR) [Escherichia coli strain W444]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=740923 QC806_RS22080 WP_000644904.1 4512807..4513832(+) (cytR) [Escherichia coli strain W444]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628