Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   K6J91_RS18520 Genome accession   NZ_AP024624
Coordinates   3533232..3533945 (-) Length   237 a.a.
NCBI ID   WP_121549135.1    Uniprot ID   -
Organism   Bacillus subtilis strain BEST3106     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3528232..3538945
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6J91_RS18500 (BsBEST3106_35550) ghrB 3528376..3529353 (+) 978 WP_010886621.1 bifunctional glyoxylate/hydroxypyruvate reductase B -
  K6J91_RS18505 (BsBEST3106_35560) psdB 3529391..3531331 (-) 1941 WP_003243432.1 lantibiotic ABC transporter permease PsdB -
  K6J91_RS18510 (BsBEST3106_35570) psdA 3531306..3532085 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  K6J91_RS18515 (BsBEST3106_35580) psdS 3532168..3533238 (-) 1071 WP_003242699.1 two-component sensor histidine kinase PsdS -
  K6J91_RS18520 (BsBEST3106_35590) braR 3533232..3533945 (-) 714 WP_121549135.1 two-component system response regulator PsdR Regulator
  K6J91_RS18525 (BsBEST3106_35600) - 3534092..3534300 (+) 209 Protein_3606 hypothetical protein -
  K6J91_RS18530 (BsBEST3106_35610) yvcN 3534336..3535100 (-) 765 WP_015251150.1 arylamine N-acetyltransferase -
  K6J91_RS18535 (BsBEST3106_35620) crh 3535101..3535358 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  K6J91_RS18540 (BsBEST3106_35630) whiA 3535382..3536332 (-) 951 WP_003228147.1 DNA-binding protein WhiA -
  K6J91_RS18545 (BsBEST3106_35640) mgfK 3536355..3537308 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  K6J91_RS18550 (BsBEST3106_35650) rapZ 3537310..3538197 (-) 888 WP_003243903.1 RNase adapter RapZ -
  K6J91_RS18555 (BsBEST3106_35660) rppI 3538222..3538698 (-) 477 WP_014481002.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=74087 K6J91_RS18520 WP_121549135.1 3533232..3533945(-) (braR) [Bacillus subtilis strain BEST3106]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RIDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSSRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=74087 K6J91_RS18520 WP_121549135.1 3533232..3533945(-) (braR) [Bacillus subtilis strain BEST3106]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGATTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGATCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGTGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCTCCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTTTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGTTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.982

94.515

0.435

Multiple sequence alignment