Detailed information NTG0740762

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QC809_RS22280
• Genome accession: NZ_CP122499
• Coordinates: 4510142..4511167 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain W409
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4505142..4516167

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QC809_RS22260	metJ	4506203..4506520 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
QC809_RS22265	yiiX	4506704..4507312 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
QC809_RS22270	rpmE	4507373..4507585 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
QC809_RS22275	priA	4507788..4509986 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
QC809_RS22280	cytR	4510142..4511167 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
QC809_RS22285	ftsN	4511259..4512218 (+)	960	WP_000068828.1	cell division protein FtsN	-
QC809_RS22290	hslV	4512311..4512841 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QC809_RS22295	hslU	4512851..4514182 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
QC809_RS22300	menA	4514249..4515175 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QC809_RS22305	rraA	4515268..4515753 (+)	486	WP_063084769.1	ribonuclease E activity regulator RraA	-
QC809_RS22310	zapB	4515838..4516083 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=740762 QC809_RS22280 WP_000644904.1 4510142..4511167(+) (cytR) [Escherichia coli strain W409]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=740762 QC809_RS22280 WP_000644904.1 4510142..4511167(+) (cytR) [Escherichia coli strain W409]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628