Detailed information NTG0740682

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QC805_RS21380
• Genome accession: NZ_CP122496
• Coordinates: 4335201..4336226 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain a7
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4330201..4341226

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QC805_RS21360	metJ	4331262..4331579 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
QC805_RS21365	yiiX	4331763..4332371 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
QC805_RS21370	rpmE	4332432..4332644 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
QC805_RS21375	priA	4332847..4335045 (+)	2199	WP_001355569.1	primosomal protein N'	Machinery gene
QC805_RS21380	cytR	4335201..4336226 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
QC805_RS21385	ftsN	4336318..4337277 (+)	960	WP_000068828.1	cell division protein FtsN	-
QC805_RS21390	hslV	4337370..4337900 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QC805_RS21395	hslU	4337910..4339241 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
QC805_RS21400	menA	4339308..4340234 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QC805_RS21405	rraA	4340327..4340812 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
QC805_RS21410	zapB	4340897..4341142 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=740682 QC805_RS21380 WP_000644904.1 4335201..4336226(+) (cytR) [Escherichia coli strain a7]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=740682 QC805_RS21380 WP_000644904.1 4335201..4336226(+) (cytR) [Escherichia coli strain a7]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628