Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | AA2Tth_RS10435 | Genome accession | NZ_AP019792 |
| Coordinates | 1921536..1921844 (+) | Length | 102 a.a. |
| NCBI ID | WP_024119555.1 | Uniprot ID | - |
| Organism | Thermus thermophilus strain AA2-20 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1916536..1926844
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AA2Tth_RS10405 (TthAA220_20340) | - | 1917615..1918079 (+) | 465 | WP_143586880.1 | hypothetical protein | - |
| AA2Tth_RS10410 (TthAA220_20350) | pfkA | 1918056..1919024 (-) | 969 | WP_143586882.1 | 6-phosphofructokinase | - |
| AA2Tth_RS10415 (TthAA220_20360) | rsmI | 1919021..1919815 (-) | 795 | WP_143586885.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| AA2Tth_RS10420 (TthAA220_20370) | - | 1919817..1920314 (-) | 498 | WP_143586887.1 | TFIIB-type zinc ribbon-containing protein | - |
| AA2Tth_RS10425 (TthAA220_20380) | - | 1920377..1920904 (-) | 528 | WP_011173971.1 | inorganic diphosphatase | - |
| AA2Tth_RS10430 (TthAA220_20390) | - | 1920937..1921563 (+) | 627 | WP_011173972.1 | YcxB family protein | - |
| AA2Tth_RS10435 (TthAA220_20400) | comEA | 1921536..1921844 (+) | 309 | WP_024119555.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| AA2Tth_RS10440 (TthAA220_20410) | comA/comEC | 1921841..1923874 (+) | 2034 | WP_143586889.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| AA2Tth_RS10445 (TthAA220_20420) | - | 1923862..1924671 (-) | 810 | WP_143586891.1 | ParB/RepB/Spo0J family partition protein | - |
| AA2Tth_RS10450 (TthAA220_20430) | soj | 1924655..1925404 (-) | 750 | WP_011173976.1 | chromosome-partitioning ATPase Soj | - |
| AA2Tth_RS10455 (TthAA220_20440) | rsmG | 1925398..1926147 (-) | 750 | WP_143586893.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | - |
Sequence
Protein
Download Length: 102 a.a. Molecular weight: 10947.23 Da Isoelectric Point: 10.3435
>NTDB_id=74059 AA2Tth_RS10435 WP_024119555.1 1921536..1921844(+) (comEA) [Thermus thermophilus strain AA2-20]
MVLGYLLAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
MVLGYLLAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
Nucleotide
Download Length: 309 bp
>NTDB_id=74059 AA2Tth_RS10435 WP_024119555.1 1921536..1921844(+) (comEA) [Thermus thermophilus strain AA2-20]
CTGGTCCTCGGCTACCTCCTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAGGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTAGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTTCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
CTGGTCCTCGGCTACCTCCTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAGGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTAGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTTCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Thermus thermophilus HB27 |
100 |
100 |
1 |
| comEA | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
39.815 |
100 |
0.422 |