Detailed information NTG0074039

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: AA2Tth_RS02395
• Genome accession: NZ_AP019792
• Coordinates: 426565..427479 (-)
• Length: 304 a.a.
• NCBI ID: WP_143584748.1
• Uniprot ID: A0AAD1NXT4
• Organism: Thermus thermophilus strain AA2-20
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 421565..432479

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AA2Tth_RS02365 (TthAA220_04580)	-	421569..422489 (-)	921	WP_124104918.1	carbohydrate kinase family protein	-
AA2Tth_RS02370 (TthAA220_04590)	guaB	422634..424115 (+)	1482	WP_143584743.1	IMP dehydrogenase	-
AA2Tth_RS02375 (TthAA220_04600)	-	424121..424351 (-)	231	WP_011172522.1	hypothetical protein	-
AA2Tth_RS02380 (TthAA220_04610)	-	424392..424877 (+)	486	WP_143584744.1	hypothetical protein	-
AA2Tth_RS02385 (TthAA220_04620)	-	424822..425247 (-)	426	WP_143584746.1	disulfide bond formation protein B	-
AA2Tth_RS02390 (TthAA220_04630)	-	425291..426511 (+)	1221	WP_143584747.1	Nramp family divalent metal transporter	-
AA2Tth_RS02395 (TthAA220_04640)	pilA	426565..427479 (-)	915	WP_143584748.1	signal recognition particle-docking protein FtsY	Machinery gene
AA2Tth_RS02400 (TthAA220_04650)	-	427479..427919 (-)	441	WP_143584750.1	hypothetical protein	-
AA2Tth_RS02405 (TthAA220_04660)	gltX	427936..429342 (-)	1407	WP_143584751.1	glutamate--tRNA ligase	-
AA2Tth_RS02410 (TthAA220_04670)	lptB	429397..430125 (+)	729	WP_014630089.1	LPS export ABC transporter ATP-binding protein	-
AA2Tth_RS11895 (TthAA220_04680)	-	430128..431471 (+)	1344	WP_143584753.1	DUF3084 domain-containing protein	-
AA2Tth_RS11900	prmC	431373..432266 (-)	894	Protein_463	peptide chain release factor N(5)-glutamine methyltransferase	-

Sequence

Protein

• Length: 304 a.a.
• Molecular weight: 32723.14 Da
• Isoelectric Point: 9.4242

>NTDB_id=74039 AA2Tth_RS02395 WP_143584748.1 426565..427479(-) (pilA) [Thermus thermophilus strain AA2-20]
MGLFDRLRAGLAKTRERLLKAIPWGGDPEEVLEELEMALLAADVGVAATEELLKEVRASGRRDLKEVVKEKLVQMLEPDE
RRATLRKLGFRPQKLRPVEPQGHVVMVVGVNGVGKTTTIAKLGRLYQGLGKKVLFCAGDTFRAAGGTQLAEWGKRLGIPV
IQGPEGADPAALAFDAAQARKARGLDLLFVDTAGRLHTKQGLMEELKKVKRAIAKADPGEPGEVWLVLDAVTGQNGLEQA
KRFHEAVGLTGVIVTKLDGTAKGGVLVPIVRTLKVPIRFIGVGEGPDDLQPFDAEAFVEALLEA

Nucleotide

• Length: 915 bp

>NTDB_id=74039 AA2Tth_RS02395 WP_143584748.1 426565..427479(-) (pilA) [Thermus thermophilus strain AA2-20]
ATGGGCCTCTTTGACCGGCTCAGGGCGGGCCTCGCCAAGACCCGGGAAAGGCTCCTCAAGGCCATCCCCTGGGGCGGCGA
CCCCGAGGAGGTCCTGGAGGAGCTGGAGATGGCCCTCCTCGCCGCCGACGTGGGGGTGGCGGCCACGGAGGAGCTCCTCA
AGGAGGTGCGGGCCTCGGGGCGGCGGGACCTGAAAGAGGTGGTGAAGGAGAAGCTCGTCCAGATGCTGGAGCCGGACGAG
CGGCGGGCCACGCTGAGGAAGCTCGGCTTCCGTCCCCAGAAGCTCCGCCCCGTGGAGCCTCAGGGGCACGTGGTGATGGT
GGTGGGGGTGAACGGGGTGGGCAAGACCACCACCATCGCCAAGCTGGGCCGCCTCTACCAGGGCCTCGGCAAGAAGGTCC
TCTTCTGCGCCGGGGACACCTTCCGCGCCGCAGGGGGAACCCAGCTCGCGGAGTGGGGGAAGCGCCTCGGGATCCCGGTG
ATCCAGGGCCCCGAGGGGGCGGACCCCGCCGCCCTCGCCTTTGACGCCGCCCAGGCCCGCAAAGCCCGGGGCCTGGACCT
CCTCTTCGTGGACACCGCGGGCCGCCTCCACACCAAGCAGGGCCTCATGGAGGAGCTCAAGAAGGTGAAGCGGGCCATCG
CCAAGGCGGACCCCGGGGAGCCGGGGGAGGTGTGGCTCGTGCTGGACGCCGTCACCGGGCAGAACGGCCTGGAGCAGGCC
AAGCGCTTCCACGAGGCCGTGGGCCTCACCGGGGTCATCGTCACCAAGCTGGACGGGACGGCCAAGGGCGGGGTCCTGGT
CCCCATCGTCCGCACCCTAAAGGTGCCCATCCGCTTCATCGGCGTGGGAGAAGGCCCGGACGACCTCCAGCCCTTTGACG
CCGAGGCCTTCGTGGAGGCCCTCCTCGAGGCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (103-302)

• SRP54-type protein, helical bundle domain (SRP54_N) (29-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.363	100	0.51