Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   QAO16_RS10920 Genome accession   NZ_CP122489
Coordinates   2176836..2177636 (-) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain GE-MSSA42     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2171836..2182636
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAO16_RS10910 (QAO16_10900) rlmH 2173444..2173923 (-) 480 WP_000704773.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  QAO16_RS10915 (QAO16_10905) adsA 2174291..2176609 (-) 2319 WP_000645757.1 LPXTG-anchored adenosine synthase AdsA -
  QAO16_RS10920 (QAO16_10910) vicX 2176836..2177636 (-) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  QAO16_RS10925 (QAO16_10915) - 2178024..2178812 (-) 789 WP_001104169.1 two-component system regulatory protein YycI -
  QAO16_RS10930 (QAO16_10920) yycH 2178813..2180147 (-) 1335 WP_001060137.1 two-component system activity regulator YycH -
  QAO16_RS10935 (QAO16_10925) walK 2180140..2181966 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=740339 QAO16_RS10920 WP_000088649.1 2176836..2177636(-) (vicX) [Staphylococcus aureus strain GE-MSSA42]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=740339 QAO16_RS10920 WP_000088649.1 2176836..2177636(-) (vicX) [Staphylococcus aureus strain GE-MSSA42]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TTTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGCAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACAGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGACGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACCTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474