Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   QAO16_RS00870 Genome accession   NZ_CP122489
Coordinates   138586..139404 (+) Length   272 a.a.
NCBI ID   WP_017431883.1    Uniprot ID   -
Organism   Staphylococcus aureus strain GE-MSSA42     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 133586..144404
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAO16_RS00840 (QAO16_00835) - 135042..135218 (+) 177 WP_000201924.1 hypothetical protein -
  QAO16_RS00845 (QAO16_00840) - 135215..135829 (+) 615 WP_000051376.1 hypothetical protein -
  QAO16_RS00850 (QAO16_00845) - 135942..136022 (-) 81 WP_100250272.1 hypothetical protein -
  QAO16_RS00855 (QAO16_00850) - 136369..136530 (+) 162 WP_001005407.1 SE1561 family protein -
  QAO16_RS00860 (QAO16_00855) - 136660..137175 (+) 516 WP_000163281.1 type 1 glutamine amidotransferase domain-containing protein -
  QAO16_RS00865 (QAO16_00860) sgtB 137516..138325 (+) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  QAO16_RS00870 (QAO16_00865) recX 138586..139404 (+) 819 WP_017431883.1 recombination regulator RecX Regulator
  QAO16_RS00875 (QAO16_00870) - 139382..139696 (+) 315 WP_000435806.1 YfhH family protein -
  QAO16_RS00880 (QAO16_00875) - 139711..141228 (+) 1518 WP_000535849.1 ATP-binding cassette domain-containing protein -
  QAO16_RS00885 (QAO16_00880) - 141237..142073 (+) 837 WP_000886472.1 hypothetical protein -
  QAO16_RS00890 (QAO16_00885) - 142334..143311 (-) 978 WP_000379091.1 metal-dependent hydrolase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32233.06 Da        Isoelectric Point: 6.1852

>NTDB_id=740270 QAO16_RS00870 WP_017431883.1 138586..139404(+) (recX) [Staphylococcus aureus strain GE-MSSA42]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQHLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=740270 QAO16_RS00870 WP_017431883.1 138586..139404(+) (recX) [Staphylococcus aureus strain GE-MSSA42]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGATGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAACATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTTTATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAGGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAAAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.265

100

0.993