Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   QAY60_RS00540 Genome accession   NZ_CP122488
Coordinates   125327..126127 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain IT-MRSA44     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 120327..131127
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAY60_RS00525 (QAY60_00520) walK 120989..122815 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  QAY60_RS00530 (QAY60_00525) yycH 122808..124142 (+) 1335 WP_103147999.1 two-component system activity regulator YycH -
  QAY60_RS00535 (QAY60_00530) - 124143..124931 (+) 789 WP_001104176.1 two-component system regulatory protein YycI -
  QAY60_RS00540 (QAY60_00535) vicX 125327..126127 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  QAY60_RS00545 (QAY60_00540) adsA 126353..128671 (+) 2319 WP_000645763.1 LPXTG-anchored adenosine synthase AdsA -
  QAY60_RS00550 (QAY60_00545) rlmH 129039..129518 (+) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  QAY60_RS00555 (QAY60_00550) pycC 129559..130830 (+) 1272 WP_000368662.1 Pycsar phage resistance system cytidylate cyclase PycC -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=740182 QAY60_RS00540 WP_000088649.1 125327..126127(+) (vicX) [Staphylococcus aureus strain IT-MRSA44]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=740182 QAY60_RS00540 WP_000088649.1 125327..126127(+) (vicX) [Staphylococcus aureus strain IT-MRSA44]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCACAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGATACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474