Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   QAY59_RS11230 Genome accession   NZ_CP122487
Coordinates   2234771..2235571 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain IT-MRSA45     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2229771..2240571
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAY59_RS11215 (QAY59_11205) walK 2230440..2232266 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  QAY59_RS11220 (QAY59_11210) yycH 2232259..2233593 (+) 1335 WP_001060150.1 two-component system activity regulator YycH -
  QAY59_RS11225 (QAY59_11215) - 2233594..2234382 (+) 789 WP_001104167.1 two-component system regulatory protein YycI -
  QAY59_RS11230 (QAY59_11220) vicX 2234771..2235571 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  QAY59_RS11235 (QAY59_11225) adsA 2235799..2238117 (+) 2319 WP_000645781.1 LPXTG-anchored adenosine synthase AdsA -
  QAY59_RS11240 (QAY59_11230) rlmH 2238485..2238964 (+) 480 WP_000704777.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  QAY59_RS11245 (QAY59_11235) - 2239188..2239514 (+) 327 WP_000624048.1 helix-turn-helix domain-containing protein -
  QAY59_RS11250 (QAY59_11240) - 2239551..2240384 (+) 834 WP_000694291.1 CPBP family intramembrane glutamic endopeptidase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=740175 QAY59_RS11230 WP_000088649.1 2234771..2235571(+) (vicX) [Staphylococcus aureus strain IT-MRSA45]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=740175 QAY59_RS11230 WP_000088649.1 2234771..2235571(+) (vicX) [Staphylococcus aureus strain IT-MRSA45]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGACCATATTAAAGGTTTAGGTGTTTTAGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAAGCTATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGATATGTGTCGGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGACATGTATCTAATGAGGATGCGGGCCATGCGATGACGGATGTGATTACAGGCAACACGA
AACGTATTTACCTATCACATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474