Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   QAY59_RS00540 Genome accession   NZ_CP122487
Coordinates   105847..106521 (+) Length   224 a.a.
NCBI ID   WP_001166500.1    Uniprot ID   Q99VW2
Organism   Staphylococcus aureus strain IT-MRSA45     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 100847..111521
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAY59_RS00515 (QAY59_00515) - 101062..102129 (+) 1068 WP_000980137.1 membrane protein -
  QAY59_RS00520 (QAY59_00520) - 102280..103323 (+) 1044 WP_001030771.1 alpha/beta hydrolase -
  QAY59_RS00525 (QAY59_00525) - 103652..104080 (+) 429 WP_103146373.1 hypothetical protein -
  QAY59_RS00530 (QAY59_00530) - 104289..104795 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  QAY59_RS00535 (QAY59_00535) graX 104908..105831 (+) 924 WP_103146372.1 auxiliary protein GraX/ApsX -
  QAY59_RS00540 (QAY59_00540) braR 105847..106521 (+) 675 WP_001166500.1 response regulator transcription factor GraR/ApsR Regulator
  QAY59_RS00545 (QAY59_00545) graS 106514..107554 (+) 1041 WP_001061262.1 histidine kinase GraS/ApsS -
  QAY59_RS00550 (QAY59_00550) vraF 107698..108459 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  QAY59_RS00555 (QAY59_00555) vraG 108449..110338 (+) 1890 WP_000143616.1 ABC transporter permease VraG -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26065.87 Da        Isoelectric Point: 4.3563

>NTDB_id=740093 QAY59_RS00540 WP_001166500.1 105847..106521(+) (braR) [Staphylococcus aureus strain IT-MRSA45]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=740093 QAY59_RS00540 WP_001166500.1 105847..106521(+) (braR) [Staphylococcus aureus strain IT-MRSA45]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCTTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q99VW2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397