Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   QAY83_RS07540 Genome accession   NZ_CP122484
Coordinates   1511047..1511517 (+) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain SW-MSSA63     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1506047..1516517
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAY83_RS07520 (QAY83_07510) coaW 1506356..1507159 (+) 804 WP_000862728.1 type II pantothenate kinase -
  QAY83_RS07525 (QAY83_07515) - 1507289..1507960 (-) 672 WP_000120549.1 DUF2750 domain-containing protein -
  QAY83_RS07530 (QAY83_07520) ldmS 1508359..1509552 (-) 1194 WP_000183722.1 L-aspartate--L-methionine ligase LdmS -
  QAY83_RS07535 (QAY83_07525) - 1509552..1510736 (-) 1185 WP_001291498.1 M20 family metallopeptidase -
  QAY83_RS07540 (QAY83_07530) luxS 1511047..1511517 (+) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  QAY83_RS07545 (QAY83_07535) - 1511669..1512019 (-) 351 WP_001024035.1 membrane protein -
  QAY83_RS07550 (QAY83_07540) - 1512033..1513334 (-) 1302 WP_001242310.1 pyrimidine-nucleoside phosphorylase -
  QAY83_RS07555 (QAY83_07545) deoC 1513615..1514277 (-) 663 WP_001083323.1 deoxyribose-phosphate aldolase -
  QAY83_RS07560 (QAY83_07550) deoD 1514592..1515302 (+) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  QAY83_RS07565 (QAY83_07555) - 1515423..1515866 (-) 444 WP_000070866.1 Dps family protein -
  QAY83_RS07570 (QAY83_07560) - 1516066..1516479 (-) 414 WP_001123303.1 thiol-disulfide oxidoreductase DCC family protein -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=739898 QAY83_RS07540 WP_000164421.1 1511047..1511517(+) (luxS) [Staphylococcus aureus strain SW-MSSA63]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=739898 QAY83_RS07540 WP_000164421.1 1511047..1511517(+) (luxS) [Staphylococcus aureus strain SW-MSSA63]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCCG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65329

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404