Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   P8T65_RS31435 Genome accession   NZ_CP122458
Coordinates   7152376..7154109 (-) Length   577 a.a.
NCBI ID   WP_316728554.1    Uniprot ID   -
Organism   Streptomyces sp. 11x1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 7147376..7159109
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P8T65_RS31425 (P8T65_31380) - 7148918..7150252 (+) 1335 WP_316728552.1 RNA polymerase sigma factor -
  P8T65_RS31430 (P8T65_31385) rcrQ 7150442..7152376 (-) 1935 WP_316728553.1 ABC transporter ATP-binding protein Regulator
  P8T65_RS31435 (P8T65_31390) rcrP 7152376..7154109 (-) 1734 WP_316728554.1 ABC transporter ATP-binding protein Regulator
  P8T65_RS31440 (P8T65_31395) - 7154405..7155859 (-) 1455 WP_316728556.1 FGGY family carbohydrate kinase -
  P8T65_RS31445 (P8T65_31400) - 7155929..7156234 (-) 306 WP_045557412.1 hypothetical protein -
  P8T65_RS31465 (P8T65_31420) - 7157107..7157376 (-) 270 Protein_6225 YnfA family protein -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 63124.37 Da        Isoelectric Point: 5.7716

>NTDB_id=739717 P8T65_RS31435 WP_316728554.1 7152376..7154109(-) (rcrP) [Streptomyces sp. 11x1]
MLIRLLRSHLRPYRTPITLLVLLQFVQTCATLYLPTLNADIIDEGVVKGDTGYILSFGALMVGISLVQVVCNIGAVYYGA
RTASAVGRDIRAAVFDRVQSFSAREVGHFGAPSLITRTTNDVQQVQMLVLMTFTLVVSAPIMCVGGIVLALGLDVPLSGV
LLAVVPVLGISVSLIVRRLRPLFRTMQERLDTVNRVLREQITGNRVIRAFVRDDYEKERFRKANVELTDVSLGTGRMLAL
LFPIVMTVINFSSIAVVWFGAHRIDTGGMEIGALTAFLAYLMQIVMAVMMATFMFMMMPRAEVCAERIQEVLETDTSVVP
PVEPVRELRRHGFLEVRGAGFRYPGAEEPVLRSIEVVARPGETTAVIGSTGSGKSTLLGLVPRLFDVTEGEVLVDGVDVR
ALDPKLLARTVSLVPQKPYLFSGTVATNLRYGNPDATDEELWHALEVAQAKEFVERLENGLDSPVAQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRAALARETADATVVIVAQRVATIRDADRIVVLDEGRVVGAGRHHELMAEN
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=739717 P8T65_RS31435 WP_316728554.1 7152376..7154109(-) (rcrP) [Streptomyces sp. 11x1]
GTGCTCATACGATTGCTGAGAAGTCATCTCCGTCCCTACCGGACACCGATCACCCTGCTGGTGCTGCTGCAGTTCGTGCA
GACGTGCGCCACGCTCTACCTGCCCACGCTGAACGCGGACATCATCGACGAGGGCGTGGTGAAGGGCGACACGGGTTACA
TCCTGTCCTTCGGCGCGCTGATGGTCGGTATCTCGCTGGTGCAGGTCGTCTGCAACATCGGGGCCGTGTACTACGGCGCC
CGCACCGCGTCGGCGGTCGGCCGGGACATCCGGGCCGCCGTGTTCGACCGGGTGCAGTCGTTCTCGGCGCGTGAGGTCGG
TCACTTCGGGGCCCCGTCGCTGATCACGCGGACGACGAACGACGTCCAGCAGGTGCAGATGCTGGTGCTCATGACGTTCA
CGCTGGTGGTGTCGGCGCCGATCATGTGTGTCGGCGGCATCGTGCTGGCGCTCGGGCTGGACGTGCCGCTGTCGGGAGTG
CTCCTGGCGGTCGTACCGGTGCTCGGGATCTCCGTCAGCCTGATCGTGCGCCGACTGCGCCCCCTGTTCCGCACCATGCA
GGAGCGGTTGGACACCGTGAACCGGGTGCTGCGGGAGCAGATCACCGGCAACCGGGTGATCCGGGCCTTCGTGCGGGACG
ACTACGAGAAGGAGCGGTTCCGGAAGGCGAACGTCGAACTGACGGACGTGTCGCTGGGCACCGGGCGGATGCTCGCGCTG
CTGTTCCCGATCGTCATGACGGTCATCAACTTCTCGTCGATCGCGGTGGTGTGGTTCGGAGCCCACCGGATCGACACCGG
GGGCATGGAGATCGGCGCGCTCACGGCCTTCCTCGCCTATCTGATGCAGATCGTCATGGCTGTGATGATGGCCACCTTCA
TGTTCATGATGATGCCGCGCGCCGAGGTGTGCGCCGAGCGCATCCAGGAGGTGCTGGAGACCGACACGAGCGTGGTGCCG
CCGGTCGAGCCCGTACGGGAGCTGCGGCGTCACGGGTTCCTGGAGGTCCGGGGTGCGGGGTTCCGCTATCCGGGTGCCGA
GGAGCCGGTGCTCAGGTCGATCGAGGTCGTGGCCCGGCCGGGTGAGACGACCGCGGTCATCGGGTCCACCGGCAGCGGCA
AGTCGACGCTGCTCGGGCTGGTGCCCCGGCTGTTCGACGTCACCGAGGGCGAGGTCCTGGTGGATGGCGTCGACGTACGG
GCGCTCGACCCGAAACTGCTGGCCAGGACGGTGAGTCTGGTGCCGCAGAAGCCGTATCTGTTCTCCGGGACCGTGGCGAC
GAATCTGCGGTACGGCAATCCGGACGCCACCGACGAGGAGTTGTGGCACGCGCTGGAGGTGGCGCAGGCCAAGGAATTCG
TCGAACGACTGGAGAACGGGCTGGACTCCCCCGTTGCGCAGGGCGGGACCAATGTGTCCGGCGGCCAGCGGCAGCGGCTC
GCGATCGCGCGGACGCTGGTGCAGCGGCCGGAGATCTATCTGTTCGACGACTCCTTCTCCGCGCTCGACTACGCGACCGA
CGCCGCGCTGCGGGCCGCGCTGGCGCGGGAGACCGCCGACGCGACCGTGGTGATCGTGGCCCAGCGGGTGGCGACCATCC
GGGACGCCGACCGGATCGTCGTCCTCGACGAGGGCCGCGTGGTCGGAGCCGGACGCCACCACGAGCTGATGGCGGAGAAC
GAGACCTACCGGGAGATCGTCCTCTCCCAGCTCACGGAAGCGGAGGCAGCCTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(352-498)

ABC transporter transmembrane region (ABC_membrane)

(18-288)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.071

100

0.393