Detailed information NTG0739564

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QBY78_RS24010
• Genome accession: NZ_CP122451
• Coordinates: 4946280..4947305 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644911.1
• Uniprot ID: -
• Organism: Escherichia coli strain 82.0312
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4941280..4952305

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QBY78_RS23990 (QBY78_23990)	metJ	4942465..4942782 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
QBY78_RS23995 (QBY78_23995)	yiiX	4942842..4943450 (+)	609	WP_000702302.1	YiiX family permuted papain-like enzyme	-
QBY78_RS24000 (QBY78_24000)	rpmE	4943511..4943723 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
QBY78_RS24005 (QBY78_24005)	priA	4943926..4946124 (+)	2199	WP_001350873.1	primosomal protein N'	Machinery gene
QBY78_RS24010 (QBY78_24010)	cytR	4946280..4947305 (+)	1026	WP_000644911.1	DNA-binding transcriptional regulator CytR	Regulator
QBY78_RS24015 (QBY78_24015)	ftsN	4947397..4948356 (+)	960	WP_000068834.1	cell division protein FtsN	-
QBY78_RS24020 (QBY78_24020)	hslV	4948449..4948979 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QBY78_RS24025 (QBY78_24025)	hslU	4948989..4950320 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
QBY78_RS24030 (QBY78_24030)	menA	4950387..4951313 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QBY78_RS24035 (QBY78_24035)	rraA	4951406..4951891 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
QBY78_RS24040 (QBY78_24040)	zapB	4951976..4952221 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37805.71 Da
• Isoelectric Point: 6.1617

>NTDB_id=739564 QBY78_RS24010 WP_000644911.1 4946280..4947305(+) (cytR) [Escherichia coli strain 82.0312]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHNRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=739564 QBY78_RS24010 WP_000644911.1 4946280..4947305(+) (cytR) [Escherichia coli strain 82.0312]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAATCGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGAGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625