Detailed information NTG0739477

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QBY77_RS23410
• Genome accession: NZ_CP122448
• Coordinates: 4861959..4862984 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 85.0412
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4856959..4867984

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QBY77_RS23390 (QBY77_23390)	metJ	4858144..4858461 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
QBY77_RS23395 (QBY77_23395)	yiiX	4858521..4859129 (+)	609	WP_000702297.1	YiiX family permuted papain-like enzyme	-
QBY77_RS23400 (QBY77_23400)	rpmE	4859190..4859402 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
QBY77_RS23405 (QBY77_23405)	priA	4859605..4861803 (+)	2199	WP_001298416.1	primosomal protein N'	Machinery gene
QBY77_RS23410 (QBY77_23410)	cytR	4861959..4862984 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
QBY77_RS23415 (QBY77_23415)	ftsN	4863076..4864035 (+)	960	WP_000068847.1	cell division protein FtsN	-
QBY77_RS23420 (QBY77_23420)	hslV	4864128..4864658 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QBY77_RS23425 (QBY77_23425)	hslU	4864668..4865999 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
QBY77_RS23430 (QBY77_23430)	menA	4866066..4866992 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QBY77_RS23435 (QBY77_23435)	rraA	4867085..4867570 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
QBY77_RS23440 (QBY77_23440)	zapB	4867655..4867900 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=739477 QBY77_RS23410 WP_000644904.1 4861959..4862984(+) (cytR) [Escherichia coli strain 85.0412]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=739477 QBY77_RS23410 WP_000644904.1 4861959..4862984(+) (cytR) [Escherichia coli strain 85.0412]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628