Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   OH513_RS18265 Genome accession   NZ_CP107291
Coordinates   3591028..3591624 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain CRKP_45     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3586028..3596624
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OH513_RS18250 helD 3586236..3588290 (-) 2055 WP_002898429.1 DNA helicase IV -
  OH513_RS18255 - 3588415..3588861 (+) 447 WP_002898425.1 YccF domain-containing protein -
  OH513_RS18260 yccS 3588879..3591014 (+) 2136 WP_002898422.1 YccS family putative transporter -
  OH513_RS18265 sxy/tfoX 3591028..3591624 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  OH513_RS18270 sulA 3591973..3592482 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  OH513_RS18275 ompA 3592835..3593905 (+) 1071 WP_062954987.1 porin OmpA -
  OH513_RS18280 matP 3594037..3594489 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  OH513_RS18285 - 3594675..3596432 (+) 1758 WP_002898401.1 AAA family ATPase -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=739380 OH513_RS18265 WP_004150836.1 3591028..3591624(-) (sxy/tfoX) [Klebsiella pneumoniae strain CRKP_45]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=739380 OH513_RS18265 WP_004150836.1 3591028..3591624(-) (sxy/tfoX) [Klebsiella pneumoniae strain CRKP_45]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51