Detailed information NTG0739296

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QCG47_RS09240
• Genome accession: NZ_CP122319
• Coordinates: 1922937..1923962 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain BW25113
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1917937..1928962

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QCG47_RS09210 (QCG47_09210)	zapB	1918021..1918266 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
QCG47_RS09215 (QCG47_09215)	rraA	1918351..1918836 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
QCG47_RS09220 (QCG47_09220)	menA	1918929..1919855 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QCG47_RS09225 (QCG47_09225)	hslU	1919922..1921253 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
QCG47_RS09230 (QCG47_09230)	hslV	1921263..1921793 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QCG47_RS09235 (QCG47_09235)	ftsN	1921886..1922845 (-)	960	WP_000068828.1	cell division protein FtsN	-
QCG47_RS09240 (QCG47_09240)	cytR	1922937..1923962 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
QCG47_RS09245 (QCG47_09245)	priA	1924118..1926316 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
QCG47_RS09250 (QCG47_09250)	rpmE	1926519..1926731 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
QCG47_RS09255 (QCG47_09255)	yiiX	1926792..1927400 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
QCG47_RS09260 (QCG47_09260)	metJ	1927584..1927901 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=739296 QCG47_RS09240 WP_000644904.1 1922937..1923962(-) (cytR) [Escherichia coli strain BW25113]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=739296 QCG47_RS09240 WP_000644904.1 1922937..1923962(-) (cytR) [Escherichia coli strain BW25113]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628