Detailed information NTG0739268

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: OFO16_RS11995
• Genome accession: NZ_CP107282
• Coordinates: 2612077..2615463 (+)
• Length: 1128 a.a.
• NCBI ID: WP_263837399.1
• Uniprot ID: -
• Organism: Vibrio natriegens strain PWH3a
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2607077..2620463

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OFO16_RS11975 (OFO16_11975)	erpA	2607445..2607786 (-)	342	WP_014232903.1	iron-sulfur cluster insertion protein ErpA	-
OFO16_RS11980 (OFO16_11980)	hemL	2608029..2609324 (+)	1296	WP_014232904.1	glutamate-1-semialdehyde 2,1-aminomutase	-
OFO16_RS11985 (OFO16_11985)	-	2609664..2610749 (+)	1086	WP_263837397.1	AI-2E family transporter	-
OFO16_RS11990 (OFO16_11990)	rsmC	2610826..2611851 (+)	1026	WP_263837398.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
OFO16_RS11995 (OFO16_11995)	chiS	2612077..2615463 (+)	3387	WP_263837399.1	response regulator	Regulator
OFO16_RS12000 (OFO16_12000)	-	2616338..2618020 (+)	1683	WP_263837400.1	ABC transporter substrate-binding protein	-
OFO16_RS12005 (OFO16_12005)	-	2618192..2619178 (+)	987	WP_263837401.1	ABC transporter permease	-
OFO16_RS12010 (OFO16_12010)	-	2619181..2620206 (+)	1026	WP_263837402.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127460.12 Da
• Isoelectric Point: 5.5171

>NTDB_id=739268 OFO16_RS11995 WP_263837399.1 2612077..2615463(+) (chiS) [Vibrio natriegens strain PWH3a]
MFKFYKKQKFKRLQSTLMTAFLVLSLTPLTITAFFFLQSHSQDLQEQSTSHLLSVRDTKQQQIVDYFEARETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGNDIDESRQNAQQRYIEGSGDQIKTSILPESSNFVGSERYRLLHKRYHWAYLELLKRSDF
NDILLVDINGNVTYSINKDDNYGTNLLSGRYKDSALGKAFQRLADDVSERRKRNEDYTPILISDFELENGKQVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLVADKNRESSIETLLVGSDQQPRTINTKLDDIQNSMEVINQALSGQTNVGTYTNGLDEA
IIAAYAPVKTRSVNWALVVQLPEKDAFSRIHQLEKLFVIAMLTAIILVVIASHYLSNFITSPLLKLTWAAERVSAGDLDE
STFDTVRKDEIGRLAISFERMQRSIREKIQTIKKQNEELESNIRLIQKQNEELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLISGANGTIPANQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVNLASSTRLVLELSGHLLGNKTIRI
INQVPNDLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISAGVVDDLVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDES
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASEEEILATQTQAACGHFQAPEINLENTDDLSLPENPD
GPLLYIADDEPVNLRVLESFLRLEGYRVRTVSDGPETLALVEQEKPELLLLDIMMPGMSGYQVCSELRQTFDHAELPIIM
LTALSQTGDRVRGFEAGANDYLSKPFNKQELAARIKAHLTASKAEMRHIENKVLESELRQRAEVEASLLETQGRLLEQLE
SAPEAIICLREDQRIRFANEAACKLFKRSLEQIKRSSADELIAPKFLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDVMYIFNVGGGANTARIHNLETAVEVLSRYAFDGDKEQLQKLKELGGEFTRLADKALGNKKDKQEVMREVLVEAMTRA
LEYWESVTGESKFTFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KLQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=739268 OFO16_RS11995 WP_263837399.1 2612077..2615463(+) (chiS) [Vibrio natriegens strain PWH3a]
ATGTTCAAATTCTACAAAAAACAGAAGTTTAAGCGTCTACAAAGTACGCTGATGACTGCGTTTCTTGTCCTCAGCCTTAC
GCCTCTAACCATTACCGCGTTTTTTTTCCTGCAGTCACACAGCCAAGATCTGCAAGAACAGAGCACGTCACACCTTTTGT
CGGTCAGAGATACCAAACAGCAGCAAATTGTTGACTACTTTGAAGCACGCGAAACTGAAGTGATGGGCTTTGTCCGTTCA
GAGTTAGCCTATGCCAGCGGCGGGCGCTTCTATGGTTTAGTCAATGCGTTTAGTCGATTAGGAAATGACATCGACGAATC
ACGTCAAAATGCACAACAACGTTATATTGAAGGCAGTGGCGATCAGATAAAAACGTCAATATTGCCAGAGTCATCTAACT
TTGTCGGGAGTGAGCGCTATCGACTGCTACACAAGCGCTATCATTGGGCTTATTTAGAACTTCTTAAACGCTCTGACTTC
AATGACATCCTATTAGTCGATATCAACGGTAACGTTACTTACTCCATCAACAAAGATGACAATTACGGTACTAACCTTCT
CAGCGGTCGCTATAAAGATTCAGCGCTAGGCAAGGCGTTTCAGCGCTTGGCCGACGATGTCAGTGAGCGCCGCAAACGGA
ATGAAGACTACACTCCGATTCTTATCTCTGACTTTGAACTTGAAAATGGCAAGCAAGTCGCATGGCTTGGTGCTCCTATC
GTTCAACAAGGATATCTACACAGCTATGCCATGTTCCGGTTGCCAAACAACGGCATCACTAAATTAGTCGCCGACAAAAA
CCGCGAATCGTCGATTGAGACGTTGTTAGTAGGCAGCGATCAGCAACCCCGTACAATAAACACCAAACTGGATGATATCC
AAAATAGTATGGAGGTCATCAATCAGGCGCTTTCAGGTCAAACAAACGTCGGCACTTATACAAACGGGCTCGATGAAGCT
ATTATCGCCGCCTATGCGCCAGTTAAAACTCGTAGCGTGAATTGGGCGTTGGTCGTGCAATTACCAGAAAAAGACGCCTT
TTCTCGCATTCACCAGCTGGAAAAACTCTTCGTCATTGCGATGCTTACAGCAATCATACTGGTTGTGATTGCCTCACACT
ATTTATCAAATTTCATTACCTCACCACTGCTCAAATTAACCTGGGCGGCAGAGCGAGTATCAGCTGGCGATCTGGACGAA
TCCACATTTGATACCGTTAGAAAAGACGAAATTGGTCGCTTAGCCATCAGTTTTGAGCGTATGCAACGTTCCATTCGTGA
AAAAATACAGACTATCAAGAAGCAAAATGAGGAGCTGGAAAGCAACATCCGCTTAATTCAAAAACAAAATGAAGAGCTGC
AACTGGCAGACAAGCTAAAAGATGAGTTTCTGGCTACGACCTCTCATGAACTGCGTACGCCTTTGCACGGTATGGTCGGT
ATTGCGGAAACCTTGATATCCGGAGCCAACGGTACAATTCCGGCAAACCAGAAGTATCAGCTTGATATAATTATTAAAAG
TGGCCAACGTTTGGCTAACCTAGTCGACGACCTACTGGATTACCATAAAATGCGTTACGGTAGCATGGACATCCAAAAGT
CGGCCGTTAATCTGGCAAGTTCAACCCGATTGGTACTGGAGTTGTCTGGTCACTTACTTGGTAACAAGACCATTCGAATC
ATCAATCAGGTACCTAATGATCTCAAAGCAGTCTCAGCAGACCCACAACGACTTGAACAGGTGCTGTACAACCTGATAGG
CAACGCAATTAAGTACACCTCTGAAGGTAAGATCGTTATTTCTGCAGGAGTCGTAGACGATTTAGTTCGCGTTCAAGTGG
TCGATACCGGACAAGGTATTCCTGCTGAGCACCTTGAGCACATCTTTGAGCCTTTAATTCAGGCAGGACAGGATGAAAGT
CGCTATCGTCAAGGTGCGGGGTTAGGTTTATCAATTAGCCGCCAGTTGATTGAGCTAATGGGTGGCTCCTTATATGTCAG
CAGCCAACCTATGGTAGGGACCACATTCAGCTTCACTCTGCCTCTCGCCAGTGAAGAAGAGATCTTAGCAACACAGACGC
AGGCAGCCTGTGGGCACTTTCAGGCTCCAGAAATTAACCTTGAGAACACAGACGACCTATCGCTACCAGAAAACCCAGAT
GGTCCGCTACTTTATATAGCAGACGATGAACCAGTCAACCTACGAGTACTTGAAAGCTTTTTACGCTTAGAAGGCTATCG
TGTAAGAACCGTTTCAGATGGCCCTGAAACACTTGCTCTTGTCGAACAAGAAAAGCCTGAACTGCTGCTGCTCGATATCA
TGATGCCAGGAATGAGTGGCTATCAAGTATGTAGTGAACTGCGTCAAACCTTTGATCATGCTGAGCTGCCAATCATTATG
CTAACCGCCTTAAGCCAAACTGGAGACCGAGTTAGAGGCTTTGAAGCAGGCGCAAATGATTATTTGTCGAAGCCTTTTAA
CAAACAAGAGCTTGCAGCCAGAATTAAAGCCCATTTAACCGCAAGCAAAGCAGAGATGCGTCATATTGAGAATAAGGTAC
TTGAGTCGGAACTTCGTCAACGAGCTGAAGTCGAAGCGAGCTTGCTTGAAACTCAGGGTCGTCTGCTAGAGCAACTAGAA
TCCGCTCCTGAAGCCATTATTTGCTTGCGCGAAGATCAGCGTATTCGATTTGCCAACGAAGCTGCATGTAAGCTCTTCAA
ACGCAGTTTGGAGCAAATTAAACGATCTTCAGCTGATGAGCTTATTGCTCCAAAATTTCTAACCGTTAAACAGCCACATT
ATTGTGGAAAAATTGATATCTACATTGAGGACATTCGCCAAAACATTGAAGCGGATATTCTCAAGCTTCCTGAAGGTTCC
GGTTTAGACGTTATGTACATATTCAATGTGGGCGGCGGCGCAAATACAGCCCGTATTCACAATCTGGAAACGGCAGTAGA
GGTTCTGTCTCGCTATGCCTTTGATGGCGACAAAGAACAGCTACAGAAGCTTAAAGAGCTTGGAGGCGAGTTCACTCGAC
TGGCAGACAAAGCGTTAGGTAATAAAAAAGACAAACAGGAAGTGATGCGTGAAGTACTGGTCGAGGCAATGACTCGTGCT
TTGGAATACTGGGAGTCTGTGACTGGCGAAAGTAAGTTTACCTTTGCCGAGCAAAGTGGCCTTTGGCGCGTTTACCTCGA
TAGAAGTACGCTACAAACCCGTACTTTAGATAAATACATGCGTATTGAAACCTTACCTAAAACTCCGCGCTGGAGAACGG
TTTTAAGCTCTATCGAGTTTATACTCGAGCATTGTAAAGAACAAAGTCCGGAGCGTGCTTACATTGAAGCACAGAGAGAT
AAACTGCAACGGTTACTTACCAGCTAG

Domains

Predicted by InterproScan.

• PAS domain (PAS_8) (879-917)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (725-836)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	75.199	100	0.753