Detailed information NTG0739142

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QCG49_RS12765
• Genome accession: NZ_CP122317
• Coordinates: 2626940..2627965 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain HT-948
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2621940..2632965

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QCG49_RS12735 (QCG49_12735)	zapB	2622024..2622269 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
QCG49_RS12740 (QCG49_12740)	rraA	2622354..2622839 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
QCG49_RS12745 (QCG49_12745)	menA	2622932..2623858 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QCG49_RS12750 (QCG49_12750)	hslU	2623925..2625256 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
QCG49_RS12755 (QCG49_12755)	hslV	2625266..2625796 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QCG49_RS12760 (QCG49_12760)	ftsN	2625889..2626848 (-)	960	WP_000068828.1	cell division protein FtsN	-
QCG49_RS12765 (QCG49_12765)	cytR	2626940..2627965 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
QCG49_RS12770 (QCG49_12770)	priA	2628121..2630319 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
QCG49_RS12775 (QCG49_12775)	rpmE	2630522..2630734 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
QCG49_RS12780 (QCG49_12780)	yiiX	2630795..2631403 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
QCG49_RS12785 (QCG49_12785)	metJ	2631587..2631904 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=739142 QCG49_RS12765 WP_000644904.1 2626940..2627965(-) (cytR) [Escherichia coli strain HT-948]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=739142 QCG49_RS12765 WP_000644904.1 2626940..2627965(-) (cytR) [Escherichia coli strain HT-948]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628