Detailed information NTG0739142

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: OHM01_RS09110
• Genome accession: NZ_CP107274
• Coordinates: 1734622..1735881 (-)
• Length: 419 a.a.
• NCBI ID: WP_263936389.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain 1145734
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1729622..1740881

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHM01_RS09085 (OHM01_09085)	-	1730684..1731070 (+)	387	Protein_1749	pilin	-
OHM01_RS09090 (OHM01_09090)	-	1731110..1731463 (+)	354	Protein_1750	pilin	-
OHM01_RS09100 (OHM01_09100)	pilE	1732520..1733023 (+)	504	WP_263936388.1	pilin	Machinery gene
OHM01_RS09105 (OHM01_09105)	-	1733567..1734358 (+)	792	WP_263936487.1	opacity family porin	-
OHM01_RS09110 (OHM01_09110)	pilA	1734622..1735881 (-)	1260	WP_263936389.1	signal recognition particle-docking protein FtsY	Machinery gene
OHM01_RS09115 (OHM01_09115)	msrAB	1736027..1737595 (+)	1569	WP_003687002.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
OHM01_RS09120 (OHM01_09120)	-	1737679..1738161 (-)	483	WP_003694396.1	CinA family protein	-
OHM01_RS09125 (OHM01_09125)	-	1738188..1739036 (-)	849	WP_003687000.1	mechanosensitive ion channel family protein	-
OHM01_RS09130 (OHM01_09130)	-	1739130..1740131 (-)	1002	WP_003686999.1	thiamine ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 419 a.a.
• Molecular weight: 44513.92 Da
• Isoelectric Point: 4.8618

>NTDB_id=739142 OHM01_RS09110 WP_263936389.1 1734622..1735881(-) (pilA) [Neisseria gonorrhoeae strain 1145734]
MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVESLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAG
EAAERVESAKEAVAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
GDMGMDATEYLMKDVRGRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKY
FQAQGKSVLLAAGDTFRAAAREQLQAWGGRNNVTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEI
KKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVPVRYIGVGE
GIDDLRPFDARAFVDALLD

Nucleotide

• Length: 1260 bp

>NTDB_id=739142 OHM01_RS09110 WP_263936389.1 1734622..1735881(-) (pilA) [Neisseria gonorrhoeae strain 1145734]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGCCGGCTCTCGAGGAGGCCCAAGTTCAGGAAACCGCAGCAAA
AGTAGAATCTGAAGTTGCTCAAATAGTTGGAAATATTAAAGAAGATGTCGAATCTTTAGCAGAAAGCGTCAAAGGGCGGG
CCGAATCTGCCGTTGAAACCGTCAGCGGTGCGGTTGAACAGGTAAAGGAAACCGTTGCCGAGATGCCGTCTGAAGCAGGG
GAAGCGGCGGAACGCGTTGAATCCGCAAAAGAAGCTGTTGCCGAAACCGTCGGCGAGGCTGTCGGGCAAGTTCAAGAAGC
CGTTGCGACAACTGAAGAACACAAGCTCGGTTGGGCTGCGCGTTTGAAACAAGGCTTGGCCAAATCACGCGACAAAATGG
CGAAATCGCTGGCCGGCGTGTTCGGCGGCGGACAAATCGGCGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACC
GGCGATATGGGCATGGATGCCACCGAATACCTGATGAAAGACGTGCGCGGCCGCGTCAGCCTCAAAGGGCTGAAAGACGG
CAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGAAA
CTAAAGAGCCTTTCGTGATTATGCTTGCCGGTATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAACTCGCCAAATAT
TTCCAAGCGCAGGGCAAATCCGTATTGCTGGCGGCGGGCGATACCTTCCGCGCCGCCGCCCGTGAGCAGCTTCAGGCTTG
GGGCGGGCGCAACAATGTAACCGTCATTTCACAAACCACGGGCGATTCCGCCGCCGTGTGCTTCGATGCCGTCCAAGCCG
CCAAAGCGCGCGGGATCGACATCGTGCTTGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATC
AAAAAAGTGAAGCGCGTGCTGCAAAAAGCCATTCCCGGCGCGCCGCACGAAATTATCGTCGTACTCGATGCCAATATCGG
GCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTGGGGCTGACGGGGCTTATCGTTACCAAACTCGACGGCA
CGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTTCCGACCGCCCCGTCCCCGTCCCCGTCCGCTACATCGGCGTGGGCGAA
GGCATAGACGACCTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-418)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	99.284	100	0.993