Detailed information NTG0739063

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QCG48_RS16675
• Genome accession: NZ_CP122316
• Coordinates: 3390939..3391964 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain HT-946
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3385939..3396964

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QCG48_RS16655 (QCG48_16655)	metJ	3387000..3387317 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
QCG48_RS16660 (QCG48_16660)	yiiX	3387501..3388109 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
QCG48_RS16665 (QCG48_16665)	rpmE	3388170..3388382 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
QCG48_RS16670 (QCG48_16670)	priA	3388585..3390783 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
QCG48_RS16675 (QCG48_16675)	cytR	3390939..3391964 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
QCG48_RS16680 (QCG48_16680)	ftsN	3392056..3393015 (+)	960	WP_000068828.1	cell division protein FtsN	-
QCG48_RS16685 (QCG48_16685)	hslV	3393108..3393638 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QCG48_RS16690 (QCG48_16690)	hslU	3393648..3394979 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
QCG48_RS16695 (QCG48_16695)	menA	3395046..3395972 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QCG48_RS16700 (QCG48_16700)	rraA	3396065..3396550 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
QCG48_RS16705 (QCG48_16705)	zapB	3396635..3396880 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=739063 QCG48_RS16675 WP_000644904.1 3390939..3391964(+) (cytR) [Escherichia coli strain HT-946]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=739063 QCG48_RS16675 WP_000644904.1 3390939..3391964(+) (cytR) [Escherichia coli strain HT-946]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628