Detailed information NTG0738952

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QCG46_RS04405
• Genome accession: NZ_CP122315
• Coordinates: 901092..902117 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain HT-947
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 896092..907117

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QCG46_RS04375 (QCG46_04375)	zapB	896176..896421 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
QCG46_RS04380 (QCG46_04380)	rraA	896506..896991 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
QCG46_RS04385 (QCG46_04385)	menA	897084..898010 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QCG46_RS04390 (QCG46_04390)	hslU	898077..899408 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
QCG46_RS04395 (QCG46_04395)	hslV	899418..899948 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QCG46_RS04400 (QCG46_04400)	ftsN	900041..901000 (-)	960	WP_000068828.1	cell division protein FtsN	-
QCG46_RS04405 (QCG46_04405)	cytR	901092..902117 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
QCG46_RS04410 (QCG46_04410)	priA	902273..904471 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
QCG46_RS04415 (QCG46_04415)	rpmE	904674..904886 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
QCG46_RS04420 (QCG46_04420)	yiiX	904947..905555 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
QCG46_RS04425 (QCG46_04425)	metJ	905739..906056 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=738952 QCG46_RS04405 WP_000644904.1 901092..902117(-) (cytR) [Escherichia coli strain HT-947]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=738952 QCG46_RS04405 WP_000644904.1 901092..902117(-) (cytR) [Escherichia coli strain HT-947]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628