Detailed information NTG0738938

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NDN54_RS09475
• Genome accession: NZ_CP107266
• Coordinates: 1796579..1797832 (-)
• Length: 417 a.a.
• NCBI ID: WP_003696286.1
• Uniprot ID: A0AB74ETB0
• Organism: Neisseria gonorrhoeae strain 9112
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1791579..1802832

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDN54_RS09445 (NDN54_09445)	-	1791736..1792089 (+)	354	Protein_1824	pilin	-
NDN54_RS09455 (NDN54_09455)	lpxC	1792591..1793514 (+)	924	WP_003687007.1	UDP-3-O-acyl-N-acetylglucosamine deacetylase	-
NDN54_RS09460 (NDN54_09460)	-	1793643..1794110 (+)	468	Protein_1826	pilin	-
NDN54_RS09465 (NDN54_09465)	-	1794486..1794991 (+)	506	Protein_1827	pilin	-
NDN54_RS09470 (NDN54_09470)	-	1795631..1796317 (+)	687	WP_265504329.1	opacity family porin	-
NDN54_RS09475 (NDN54_09475)	pilA	1796579..1797832 (-)	1254	WP_003696286.1	signal recognition particle-docking protein FtsY	Machinery gene
NDN54_RS09480 (NDN54_09480)	msrAB	1797978..1799546 (+)	1569	WP_003687002.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
NDN54_RS09485 (NDN54_09485)	-	1799630..1800115 (-)	486	WP_003687001.1	CinA family protein	-
NDN54_RS09490 (NDN54_09490)	-	1800142..1800990 (-)	849	WP_003687000.1	mechanosensitive ion channel family protein	-
NDN54_RS09495 (NDN54_09495)	-	1801084..1802085 (-)	1002	WP_003691948.1	thiamine ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 44331.70 Da
• Isoelectric Point: 4.8647

>NTDB_id=738938 NDN54_RS09475 WP_003696286.1 1796579..1797832(-) (pilA) [Neisseria gonorrhoeae strain 9112]
MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVESLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAG
EAAERVESAKEAVAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
GDMGMEATEYLMKDVRGRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKY
FQAQGKSVLLAAGDTFRAAAREQLQAWGGRNNVTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEI
KKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGI
DDLRPFDARAFVDALLD

Nucleotide

• Length: 1254 bp

>NTDB_id=738938 NDN54_RS09475 WP_003696286.1 1796579..1797832(-) (pilA) [Neisseria gonorrhoeae strain 9112]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGCCGGCTCTCGAGGAGGCCCAAGTTCAGGAAACCGCAGCAAA
AGTAGAATCTGAAGTTGCTCAAATAGTTGGAAATATTAAAGAAGATGTCGAATCTTTAGCAGAAAGCGTCAAAGGGCGGG
CCGAATCTGCCGTTGAAACCGTCAGCGGTGCGGTTGAACAGGTAAAGGAAACCGTTGCCGAGATGCCGTCTGAAGCAGGG
GAAGCGGCGGAACGCGTTGAATCCGCAAAAGAAGCTGTTGCCGAAACCGTCGGCGAGGCTGTCGGGCAAGTTCAAGAAGC
CGTTGCGACAACTGAAGAACACAAGCTCGGTTGGGCTGCGCGTTTGAAACAAGGCTTGGCCAAATCACGCGACAAAATGG
CGAAATCGCTGGCCGGCGTGTTCGGCGGCGGACAAATCGGCGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACC
GGCGATATGGGCATGGAGGCCACCGAATACCTGATGAAAGACGTGCGCGGCCGCGTCAGCCTCAAAGGGCTGAAAGACGG
CAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGAAA
CTAAAGAGCCTTTCGTGATTATGCTTGCCGGTATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAACTCGCCAAATAT
TTCCAAGCGCAGGGCAAATCCGTATTGCTGGCGGCGGGCGATACCTTCCGCGCCGCCGCCCGTGAGCAGCTTCAGGCTTG
GGGCGGGCGCAACAATGTAACCGTCATTTCACAAACCACGGGCGATTCCGCCGCCGTGTGCTTCGATGCCGTCCAAGCCG
CCAAAGCGCGCGGGATCGACATCGTGCTTGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATC
AAAAAAGTGAAGCGCGTGCTGCAAAAAGCCATTCCCGGCGCGCCGCACGAAATTATCGTCGTACTCGATGCCAATATCGG
GCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTGGGGCTGACGGGGCTTATCGTTACCAAACTCGACGGCA
CGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTTCCGACCGCCCCGTCCCCGTCCGCTACATCGGCGTGGGCGAAGGCATA
GACGACCTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	100	100	1