Detailed information NTG0738825

Bioinformatically predicted

Overview

• Name: fimV
• Type: Machinery gene
• Locus tag: N5938_RS27555
• Genome accession: NZ_CP107257
• Coordinates: 5815733..5818498 (-)
• Length: 921 a.a.
• NCBI ID: WP_116820154.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain 2019CK-00034
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5810733..5823498

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N5938_RS27530 (N5938_27530)	-	5811033..5811698 (-)	666	WP_263901702.1	SPOR domain-containing protein	-
N5938_RS27535 (N5938_27535)	folC	5811702..5812991 (-)	1290	WP_116820152.1	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	-
N5938_RS27540 (N5938_27540)	accD	5812988..5813860 (-)	873	WP_003104199.1	acetyl-CoA carboxylase, carboxyltransferase subunit beta	-
N5938_RS27545 (N5938_27545)	-	5814129..5814764 (-)	636	WP_116820153.1	phosphoribosylanthranilate isomerase	-
N5938_RS27550 (N5938_27550)	truA	5814854..5815711 (-)	858	WP_003091390.1	tRNA pseudouridine(38-40) synthase TruA	-
N5938_RS27555 (N5938_27555)	fimV	5815733..5818498 (-)	2766	WP_116820154.1	motility hub landmark protein FimV	Machinery gene
N5938_RS27560 (N5938_27560)	-	5818667..5819677 (-)	1011	WP_023095367.1	aspartate-semialdehyde dehydrogenase	-
N5938_RS27565 (N5938_27565)	asd	5819779..5820891 (-)	1113	WP_003111187.1	aspartate-semialdehyde dehydrogenase	-
N5938_RS27570 (N5938_27570)	leuB	5820961..5822043 (-)	1083	WP_003091395.1	3-isopropylmalate dehydrogenase	-
N5938_RS27575 (N5938_27575)	-	5822102..5822863 (-)	762	WP_003091396.1	class I SAM-dependent methyltransferase	-

Sequence

Protein

• Length: 921 a.a.
• Molecular weight: 97041.36 Da
• Isoelectric Point: 3.9481

>NTDB_id=738825 N5938_RS27555 WP_116820154.1 5815733..5818498(-) (fimV) [Pseudomonas aeruginosa strain 2019CK-00034]
MVRLRTLVRAIAAASVLTSGMAHGLGLGEITLKSALNQPLDAEIELLEVRDLGSGEVIPSLASPEEFSKAGVDRLYYLTD
LKFTPVVKPNGKSVIRVTSSKPVQEPYLNFLVQVLWPNGRLLREYTVLLDPPLYSPQAAASAPQAPVSAPRATGAPRAPQ
APAPAPVRTTAPAGSDTYRTVSNDTLWEIAQRNRTDRVSVPQAMLAFQELNPGAFVDGNINRLKSGQVLRIPTEQQMLER
SPREALSQVQAQNQSWRGSRNPAAGSAGARQLDATQRNAAGSAPSKVDAMDNLRLVSGEGKASKGADKGGKGDSKAIADT
LAVTKESLDSTRRENEELQSRMQDLQSQLDKLQKLIQLKDAQLAKLQGQLGAEGQGAAQPNAALPDASQPNAAAQAPAQP
GTPAAAAPTPAPAGEAPAAPAQPPVAPPPAPVAEKPPAPAVPAPAPVQAAEQPAPSFLDELLANPLWLAVIGGSALLALL
VLLMILSRRNAQKEKEEAQAFAADAGEEQEDALDLGKDGFDDLTLDEPEPQVAAAAPQVEKTTAQTSDALGEADIYIAYG
RFNQAAELLQNAIYDEPQRTDLRLKLMEVYAEMGDREGFARQENELREIGGAQPQVEQLKSRYPAMVAVAAVAGLAGAKL
AQDELDSFSLDDLSLDDSGHAAKPDAAGQDLDDAFDLSLDDLGGDDVQADLKSDSGALDDLTLDSDLDLAASTAADKPVD
DLDFGLDFAELAETPSQPKHDDLGDFSLDLDAPEDKLSDDDFLLSLNDEVPAAAPADNEFTLDTEAAEEPALSLPDDFDL
SLADEPTEPAAPEKGEDSFAAQLDEVSAQLDELASNLDEPKSAAPSFSAEDAAVASALDGDADDDFDFLSGADEAATKLD
LARAYIDMGDSEGARDILDEVLAEGNDSQQAEARELLERLA

Nucleotide

• Length: 2766 bp

>NTDB_id=738825 N5938_RS27555 WP_116820154.1 5815733..5818498(-) (fimV) [Pseudomonas aeruginosa strain 2019CK-00034]
ATGGTTCGGCTTCGTACACTGGTTCGGGCAATCGCGGCGGCCTCGGTCCTGACTTCCGGCATGGCGCATGGATTGGGACT
GGGGGAAATCACCCTGAAGTCGGCGTTGAACCAACCGTTGGATGCCGAGATCGAGCTGCTCGAAGTTCGTGACCTGGGTT
CGGGCGAGGTGATCCCGAGCCTGGCGTCGCCGGAAGAGTTCAGCAAGGCGGGCGTCGATCGCCTGTACTACCTCACCGAC
CTGAAGTTCACGCCGGTGGTGAAGCCCAACGGCAAGAGCGTCATTCGCGTGACCTCGTCGAAGCCGGTGCAGGAGCCCTA
CCTGAACTTCCTGGTCCAGGTGCTCTGGCCGAACGGCCGCCTGCTGCGCGAGTACACCGTCCTGCTGGATCCGCCGCTGT
ACTCCCCGCAGGCCGCGGCAAGCGCTCCGCAAGCGCCGGTCAGCGCGCCGCGCGCGACCGGCGCCCCGCGAGCCCCGCAG
GCTCCGGCTCCGGCTCCGGTGCGTACCACCGCGCCGGCAGGCAGCGACACCTATCGCACCGTTTCCAACGACACGCTCTG
GGAGATCGCCCAGCGCAACCGTACCGATCGCGTTTCCGTACCCCAGGCGATGCTCGCGTTCCAGGAACTGAATCCGGGCG
CCTTCGTCGATGGCAACATCAACCGGCTGAAGAGCGGCCAGGTCCTGCGCATTCCCACCGAACAGCAGATGCTGGAGCGC
TCGCCGCGCGAGGCGCTGTCCCAGGTGCAGGCGCAGAACCAGAGCTGGCGCGGCAGCCGCAATCCGGCCGCGGGCAGCGC
TGGCGCCAGGCAGTTGGATGCGACCCAGCGCAATGCCGCCGGGTCGGCGCCATCCAAGGTCGACGCCATGGACAACCTGC
GCCTGGTGTCTGGCGAGGGCAAGGCCAGCAAGGGGGCCGACAAGGGCGGGAAGGGCGACAGCAAGGCGATCGCCGATACC
CTGGCGGTGACCAAGGAAAGCCTCGATAGCACTCGCCGCGAGAACGAAGAACTGCAGAGCCGCATGCAGGATCTGCAGAG
CCAGCTGGACAAGCTGCAGAAGTTGATCCAGCTGAAGGACGCCCAGTTGGCCAAGCTGCAAGGGCAGTTGGGCGCCGAAG
GCCAGGGCGCAGCCCAGCCGAACGCAGCCCTGCCGGATGCGTCCCAGCCCAATGCAGCCGCGCAGGCGCCGGCTCAGCCC
GGGACTCCCGCTGCGGCAGCGCCGACTCCTGCTCCGGCCGGAGAAGCACCCGCCGCTCCGGCGCAGCCTCCGGTGGCGCC
GCCGCCCGCGCCAGTTGCCGAGAAGCCTCCGGCACCTGCCGTTCCGGCGCCCGCTCCGGTACAGGCGGCAGAACAGCCGG
CACCGAGCTTCCTCGACGAACTGCTGGCCAACCCGCTGTGGCTGGCGGTGATCGGCGGTAGCGCACTGCTGGCGTTGCTG
GTGCTGCTGATGATCCTGTCGCGGCGCAATGCGCAGAAAGAGAAGGAAGAAGCCCAGGCTTTCGCCGCGGATGCCGGCGA
GGAACAGGAGGATGCGCTGGACCTGGGAAAGGACGGCTTCGACGACCTGACCCTCGACGAGCCTGAACCGCAGGTCGCAG
CCGCTGCGCCGCAGGTCGAGAAGACCACTGCGCAGACTTCCGATGCGCTGGGCGAGGCCGACATCTATATCGCCTACGGG
CGCTTCAACCAGGCCGCCGAACTGTTGCAAAACGCCATCTACGACGAGCCGCAGCGCACCGACCTGCGCCTCAAGCTGAT
GGAAGTCTATGCCGAGATGGGCGATCGCGAAGGTTTCGCTCGCCAGGAAAACGAGCTGCGCGAAATCGGCGGCGCACAGC
CGCAGGTCGAGCAGCTCAAGTCGCGCTACCCGGCAATGGTCGCGGTCGCCGCGGTTGCCGGCCTGGCCGGTGCCAAGCTG
GCGCAGGACGAGCTGGATAGCTTCAGCCTCGACGACCTGTCGCTCGACGACAGCGGTCACGCGGCCAAGCCGGATGCGGC
AGGACAGGATCTCGACGACGCCTTCGACCTGAGCCTGGACGACCTGGGCGGCGACGACGTGCAGGCTGACCTCAAGTCCG
ACAGCGGGGCGCTGGACGACCTGACCCTGGACAGCGATCTGGACCTGGCGGCCTCGACCGCGGCGGACAAGCCTGTCGAC
GATCTCGACTTCGGCCTGGATTTCGCGGAGTTGGCAGAGACTCCGAGCCAACCCAAGCATGACGACCTGGGCGATTTCTC
CCTGGATCTCGATGCGCCGGAAGACAAGCTTTCGGACGACGACTTCCTGCTTTCGCTGAACGACGAGGTGCCCGCCGCGG
CGCCAGCCGACAACGAATTCACCCTCGATACCGAGGCTGCCGAAGAGCCGGCGTTGTCCCTGCCGGACGACTTCGACCTG
TCGCTGGCCGACGAGCCGACGGAGCCGGCCGCTCCGGAGAAGGGCGAGGACAGTTTCGCCGCCCAGTTGGACGAGGTGAG
TGCGCAGTTGGACGAGTTGGCCAGCAACCTTGACGAGCCGAAGAGCGCGGCGCCGAGTTTCTCCGCCGAGGATGCGGCGG
TCGCCTCTGCCCTGGACGGAGACGCCGACGATGACTTCGACTTCCTCTCCGGTGCCGACGAAGCGGCGACCAAGCTGGAT
CTGGCTCGCGCCTACATCGACATGGGCGATAGCGAAGGCGCGCGCGATATCCTCGACGAAGTCCTGGCCGAAGGTAACGA
CAGCCAGCAGGCGGAAGCCCGCGAGTTGCTGGAGCGCCTGGCCTGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
fimV	Pseudomonas aeruginosa PAK	99.023	100	0.99