Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | N5898_RS01900 | Genome accession | NZ_CP107256 |
| Coordinates | 363608..363910 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain PNUSAC004956 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 358608..368910
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5898_RS01875 (N5898_01875) | rpsR | 358971..359231 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| N5898_RS01880 (N5898_01880) | lon | 359291..361666 (-) | 2376 | WP_263908138.1 | endopeptidase La | - |
| N5898_RS01885 (N5898_01885) | - | 361683..362330 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| N5898_RS01890 (N5898_01890) | fliW | 362491..362880 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| N5898_RS01895 (N5898_01895) | proC | 362880..363611 (+) | 732 | WP_002869050.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| N5898_RS01900 (N5898_01900) | ctsT | 363608..363910 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| N5898_RS01905 (N5898_01905) | - | 363907..364569 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| N5898_RS01910 (N5898_01910) | - | 364566..365018 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| N5898_RS01915 (N5898_01915) | hemD | 365015..365644 (-) | 630 | WP_002856298.1 | uroporphyrinogen-III synthase | - |
| N5898_RS01920 (N5898_01920) | thiE | 365622..366254 (-) | 633 | WP_002856400.1 | thiamine phosphate synthase | - |
| N5898_RS01925 (N5898_01925) | thiD | 366244..367056 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| N5898_RS01930 (N5898_01930) | - | 367053..367739 (-) | 687 | WP_002869046.1 | 3-methyladenine DNA glycosylase | - |
| N5898_RS01935 (N5898_01935) | - | 367736..368497 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=738772 N5898_RS01900 WP_002855822.1 363608..363910(+) (ctsT) [Campylobacter jejuni strain PNUSAC004956]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=738772 N5898_RS01900 WP_002855822.1 363608..363910(+) (ctsT) [Campylobacter jejuni strain PNUSAC004956]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |