Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   OEG85_RS06595 Genome accession   NZ_CP107241
Coordinates   1593364..1593765 (+) Length   133 a.a.
NCBI ID   WP_023904776.1    Uniprot ID   A0AAU0BDV7
Organism   Xanthomonas hortorum strain Oregano 108     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1588364..1598765
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OEG85_RS06575 (OEG85_06575) tsaB 1589590..1590309 (+) 720 WP_115040733.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  OEG85_RS06580 (OEG85_06580) - 1590306..1591223 (+) 918 WP_268214434.1 ADP-ribosylglycohydrolase family protein -
  OEG85_RS06585 (OEG85_06585) - 1591305..1592180 (-) 876 WP_268214435.1 energy transducer TonB -
  OEG85_RS06590 (OEG85_06590) gshB 1592177..1593127 (-) 951 WP_268214436.1 glutathione synthase -
  OEG85_RS06595 (OEG85_06595) pilG 1593364..1593765 (+) 402 WP_023904776.1 twitching motility response regulator PilG Regulator
  OEG85_RS06600 (OEG85_06600) - 1593783..1594145 (+) 363 WP_006450735.1 response regulator -
  OEG85_RS06605 (OEG85_06605) - 1594145..1594675 (+) 531 WP_006450736.1 chemotaxis protein CheW -
  OEG85_RS06610 (OEG85_06610) - 1594715..1596751 (+) 2037 WP_268214437.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14690.07 Da        Isoelectric Point: 7.1350

>NTDB_id=738725 OEG85_RS06595 WP_023904776.1 1593364..1593765(+) (pilG) [Xanthomonas hortorum strain Oregano 108]
MSEHIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=738725 OEG85_RS06595 WP_023904776.1 1593364..1593765(+) (pilG) [Xanthomonas hortorum strain Oregano 108]
ATGAGTGAACACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTCATCGACGATTCGAAGACTATTCGCCG
CACCGCCGAAACGCTGCTCAAGCGAGAAGGGTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTTGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAATCAGCTCTTCAAGTCGACGCCGGTGATCATGTTGTCGTCCAAGGATGGCCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGCTCCGAGCAATATCTGACCAAGCCATTCACTCGTGAAGAACTACTGAGCGCGATTCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684