Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | FPG46_RS01875 | Genome accession | NZ_AP019751 |
| Coordinates | 389628..390053 (+) | Length | 141 a.a. |
| NCBI ID | WP_000934779.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain JRA307 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 384628..395053
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FPG46_RS01815 (SAJRA307_03490) | - | 385284..385727 (+) | 444 | WP_000435360.1 | hypothetical protein | - |
| FPG46_RS01820 (SAJRA307_03500) | - | 385742..385882 (+) | 141 | WP_057520785.1 | hypothetical protein | - |
| FPG46_RS01825 (SAJRA307_03510) | - | 385897..386529 (-) | 633 | WP_001814660.1 | hypothetical protein | - |
| FPG46_RS01830 (SAJRA307_03520) | - | 386585..386911 (+) | 327 | WP_001025595.1 | hypothetical protein | - |
| FPG46_RS15290 | - | 386908..387007 (+) | 100 | Protein_354 | hypothetical protein | - |
| FPG46_RS01840 (SAJRA307_03540) | - | 387156..387419 (+) | 264 | WP_001124198.1 | helix-turn-helix domain-containing protein | - |
| FPG46_RS01845 | - | 387432..387599 (+) | 168 | WP_144078892.1 | DUF1270 domain-containing protein | - |
| FPG46_RS01850 (SAJRA307_03550) | - | 387600..387920 (+) | 321 | WP_144078893.1 | hypothetical protein | - |
| FPG46_RS01855 (SAJRA307_03560) | - | 388014..388274 (+) | 261 | WP_000291075.1 | DUF1108 family protein | - |
| FPG46_RS01860 (SAJRA307_03570) | - | 388282..388518 (+) | 237 | WP_000802315.1 | hypothetical protein | - |
| FPG46_RS01865 (SAJRA307_03580) | - | 388511..388990 (+) | 480 | WP_000002513.1 | siphovirus Gp157 family protein | - |
| FPG46_RS01870 (SAJRA307_03590) | - | 388990..389628 (+) | 639 | WP_001043066.1 | ERF family protein | - |
| FPG46_RS01875 (SAJRA307_03600) | ssbA | 389628..390053 (+) | 426 | WP_000934779.1 | single-stranded DNA-binding protein | Machinery gene |
| FPG46_RS01880 (SAJRA307_03610) | - | 390067..390762 (+) | 696 | WP_144078894.1 | putative HNHc nuclease | - |
| FPG46_RS01885 (SAJRA307_03620) | - | 390734..391555 (+) | 822 | WP_144078895.1 | phage replisome organizer N-terminal domain-containing protein | - |
| FPG46_RS01890 (SAJRA307_03630) | - | 391568..392353 (+) | 786 | WP_000443354.1 | ATP-binding protein | - |
| FPG46_RS01895 (SAJRA307_03640) | - | 392350..392508 (+) | 159 | WP_000628833.1 | hypothetical protein | - |
| FPG46_RS01900 (SAJRA307_03650) | - | 392521..392742 (+) | 222 | WP_001123695.1 | DUF3269 family protein | - |
| FPG46_RS01905 (SAJRA307_03660) | - | 392752..393159 (+) | 408 | WP_031860309.1 | RusA family crossover junction endodeoxyribonuclease | - |
| FPG46_RS01910 (SAJRA307_03670) | - | 393159..393344 (+) | 186 | WP_001187254.1 | DUF3113 family protein | - |
| FPG46_RS01915 (SAJRA307_03680) | - | 393345..393962 (+) | 618 | WP_144078896.1 | SA1788 family PVL leukocidin-associated protein | - |
| FPG46_RS01920 (SAJRA307_03690) | - | 393962..394216 (+) | 255 | WP_031867833.1 | DUF3310 domain-containing protein | - |
| FPG46_RS01925 (SAJRA307_03700) | - | 394222..394464 (+) | 243 | WP_031911822.1 | SAV1978 family virulence-associated passenger protein | - |
| FPG46_RS01930 (SAJRA307_03710) | - | 394478..394885 (+) | 408 | WP_144079023.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15917.38 Da Isoelectric Point: 4.9008
>NTDB_id=73797 FPG46_RS01875 WP_000934779.1 389628..390053(+) (ssbA) [Staphylococcus aureus strain JRA307]
MLNRTVLVGRLTKDPEYRTAPNGVSVTTFTIAVNRTFTNAQGEREADFINCVTFRKQAENVNNYLSKGSLAGVDGRLQSR
SYDNKEGRRVFVTEVVADSVQFLEPKNNNQQQNNNYQQQGQAQTGNNPFDNTEEDFSDLPF
MLNRTVLVGRLTKDPEYRTAPNGVSVTTFTIAVNRTFTNAQGEREADFINCVTFRKQAENVNNYLSKGSLAGVDGRLQSR
SYDNKEGRRVFVTEVVADSVQFLEPKNNNQQQNNNYQQQGQAQTGNNPFDNTEEDFSDLPF
Nucleotide
Download Length: 426 bp
>NTDB_id=73797 FPG46_RS01875 WP_000934779.1 389628..390053(+) (ssbA) [Staphylococcus aureus strain JRA307]
ATGTTAAACAGAACAGTATTAGTAGGACGCTTAACAAAAGATCCAGAATATAGAACAGCGCCAAATGGTGTGAGTGTTAC
CACTTTCACTATCGCAGTTAACAGAACATTTACTAACGCTCAAGGAGAACGTGAGGCAGACTTTATTAACTGTGTAACTT
TTAGAAAACAAGCAGAAAATGTAAATAATTATTTATCCAAAGGGTCATTGGCTGGCGTTGATGGACGTTTACAATCACGC
AGTTACGATAACAAAGAAGGGCGACGTGTATTTGTGACAGAAGTAGTAGCGGACAGCGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACAAAACAACAATTATCAACAACAAGGACAAGCTCAAACTGGCAATAATCCGTTTGACAATACTGAAG
AAGATTTTTCAGACCTCCCGTTCTGA
ATGTTAAACAGAACAGTATTAGTAGGACGCTTAACAAAAGATCCAGAATATAGAACAGCGCCAAATGGTGTGAGTGTTAC
CACTTTCACTATCGCAGTTAACAGAACATTTACTAACGCTCAAGGAGAACGTGAGGCAGACTTTATTAACTGTGTAACTT
TTAGAAAACAAGCAGAAAATGTAAATAATTATTTATCCAAAGGGTCATTGGCTGGCGTTGATGGACGTTTACAATCACGC
AGTTACGATAACAAAGAAGGGCGACGTGTATTTGTGACAGAAGTAGTAGCGGACAGCGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACAAAACAACAATTATCAACAACAAGGACAAGCTCAAACTGGCAATAATCCGTTTGACAATACTGAAG
AAGATTTTTCAGACCTCCCGTTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
78.505 |
75.887 |
0.596 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
52.632 |
100 |
0.567 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
75.177 |
0.433 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
44.348 |
81.56 |
0.362 |
| ssbA | Streptococcus mutans UA159 |
44.348 |
81.56 |
0.362 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
43.22 |
83.688 |
0.362 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
43.22 |
83.688 |
0.362 |