Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   OD347_RS07645 Genome accession   NZ_CP107079
Coordinates   1448485..1448949 (-) Length   154 a.a.
NCBI ID   WP_013352067.1    Uniprot ID   A0AAP7TCI0
Organism   Bacillus velezensis strain LT-2     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1443485..1453949
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OD347_RS07625 - 1443964..1445784 (+) 1821 WP_088612723.1 PAS domain-containing protein -
  OD347_RS07630 - 1445765..1446978 (-) 1214 Protein_1447 aminotransferase A -
  OD347_RS07635 - 1447180..1447341 (-) 162 WP_013352065.1 hypothetical protein -
  OD347_RS07640 cheV 1447530..1448441 (+) 912 WP_013352066.1 chemotaxis protein CheV -
  OD347_RS07645 kre 1448485..1448949 (-) 465 WP_013352067.1 YkyB family protein Regulator
  OD347_RS07650 - 1449072..1450364 (-) 1293 WP_088612726.1 MFS transporter -
  OD347_RS07655 - 1450440..1450934 (-) 495 WP_088613850.1 L,D-transpeptidase family protein -
  OD347_RS07660 - 1451009..1451872 (-) 864 WP_088612727.1 metallophosphoesterase -
  OD347_RS07665 fadH 1452016..1452780 (+) 765 WP_071346905.1 2,4-dienoyl-CoA reductase -
  OD347_RS07670 - 1452894..1453442 (+) 549 WP_088612728.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17798.57 Da        Isoelectric Point: 10.4864

>NTDB_id=737937 OD347_RS07645 WP_013352067.1 1448485..1448949(-) (kre) [Bacillus velezensis strain LT-2]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNLLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=737937 OD347_RS07645 WP_013352067.1 1448485..1448949(-) (kre) [Bacillus velezensis strain LT-2]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACTTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCCCTTGCCG
CCAACAGACAGCAGCCCGCTTATCATAAACCCGTGTTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

93.506

100

0.935