Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   OD347_RS06200 Genome accession   NZ_CP107079
Coordinates   1191578..1191769 (+) Length   63 a.a.
NCBI ID   WP_013351814.1    Uniprot ID   A0AAP7TCS9
Organism   Bacillus velezensis strain LT-2     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1186578..1196769
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OD347_RS06170 argF 1187420..1188376 (+) 957 WP_088612583.1 ornithine carbamoyltransferase -
  OD347_RS06175 - 1188468..1188647 (+) 180 WP_013351809.1 YjzC family protein -
  OD347_RS06180 - 1188688..1188876 (-) 189 WP_013351810.1 YjzD family protein -
  OD347_RS06185 - 1189137..1189871 (+) 735 WP_045507014.1 hypothetical protein -
  OD347_RS06190 - 1189952..1190518 (+) 567 WP_088612585.1 hypothetical protein -
  OD347_RS06195 med 1190612..1191565 (+) 954 WP_013351813.1 BMP family ABC transporter substrate-binding protein Regulator
  OD347_RS06200 comZ 1191578..1191769 (+) 192 WP_013351814.1 ComZ family protein Regulator
  OD347_RS06205 - 1191798..1192016 (-) 219 WP_088612586.1 hypothetical protein -
  OD347_RS06210 - 1192182..1193120 (+) 939 WP_013351816.1 beta-ketoacyl-ACP synthase III -
  OD347_RS06215 fabF 1193144..1194382 (+) 1239 WP_088612587.1 beta-ketoacyl-ACP synthase II -
  OD347_RS06220 - 1194466..1195251 (+) 786 WP_088612588.1 DUF2268 domain-containing protein -
  OD347_RS06225 - 1195425..1196411 (+) 987 WP_014470616.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7202.35 Da        Isoelectric Point: 4.3344

>NTDB_id=737930 OD347_RS06200 WP_013351814.1 1191578..1191769(+) (comZ) [Bacillus velezensis strain LT-2]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMNLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=737930 OD347_RS06200 WP_013351814.1 1191578..1191769(+) (comZ) [Bacillus velezensis strain LT-2]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
AGGCATTGATCTGTCTATGGAAATGATTCAGCCGTTCATGAACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

87.931

92.063

0.81