Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ODQ18_RS11165 Genome accession   NZ_CP107039
Coordinates   2128732..2129526 (-) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain 11060     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 2123732..2134526
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ODQ18_RS11130 (ODQ18_11130) ephM 2124575..2125435 (-) 861 WP_014479220.1 epoxide hydrolase EphM -
  ODQ18_RS11135 (ODQ18_11135) spdL 2125422..2125754 (-) 333 WP_003242803.1 SdpC immunity protein SpdL -
  ODQ18_RS11140 (ODQ18_11140) yfhK 2125839..2126357 (-) 519 WP_015252515.1 SH3 domain-containing protein -
  ODQ18_RS11145 (ODQ18_11145) yfhJ 2126502..2126771 (-) 270 WP_003243789.1 YfhJ family protein -
  ODQ18_RS11150 (ODQ18_11150) sspK 2126896..2127048 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  ODQ18_RS11155 (ODQ18_11155) yfhI 2127080..2128273 (-) 1194 WP_003243500.1 MFS transporter -
  ODQ18_RS11160 (ODQ18_11160) yfhH 2128416..2128730 (-) 315 WP_003244592.1 YfhH family protein -
  ODQ18_RS11165 (ODQ18_11165) recX 2128732..2129526 (-) 795 WP_029726844.1 recombination regulator RecX Regulator
  ODQ18_RS11170 (ODQ18_11170) yfhF 2129615..2130526 (+) 912 WP_041851148.1 TIGR01777 family oxidoreductase -
  ODQ18_RS11175 (ODQ18_11175) yfhE 2130581..2130691 (+) 111 WP_003223230.1 YfhE family protein -
  ODQ18_RS11180 (ODQ18_11180) yfhD 2130758..2130949 (+) 192 WP_041851149.1 YfhD family protein -
  ODQ18_RS11185 (ODQ18_11185) yfhC 2130988..2131572 (-) 585 WP_015252518.1 NAD(P)H nitroreductase -
  ODQ18_RS11190 (ODQ18_11190) yfhB 2131660..2132541 (-) 882 WP_041851150.1 PhzF family phenazine biosynthesis isomerase -
  ODQ18_RS11195 (ODQ18_11195) sxzA 2132656..2133687 (-) 1032 WP_003233568.1 FecCD family ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=737654 ODQ18_RS11165 WP_029726844.1 2128732..2129526(-) (recX) [Bacillus subtilis strain 11060]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=737654 ODQ18_RS11165 WP_029726844.1 2128732..2129526(-) (recX) [Bacillus subtilis strain 11060]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996