Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   OD459_RS08665 Genome accession   NZ_CP107027
Coordinates   1722870..1723673 (-) Length   267 a.a.
NCBI ID   WP_263599844.1    Uniprot ID   A0AA46PFA5
Organism   Cytobacillus firmus strain M7     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1717870..1728673
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OD459_RS08625 (OD459_08625) - 1718288..1718512 (+) 225 WP_048011776.1 hypothetical protein -
  OD459_RS08630 (OD459_08630) mutY 1718552..1719646 (-) 1095 WP_263599843.1 A/G-specific adenine glycosylase -
  OD459_RS08635 (OD459_08635) - 1719853..1720833 (+) 981 WP_197214465.1 metal-dependent hydrolase -
  OD459_RS08640 (OD459_08640) - 1720867..1721136 (-) 270 WP_048011773.1 YfhJ family protein -
  OD459_RS08645 (OD459_08645) - 1721264..1721434 (+) 171 WP_048011772.1 small, acid-soluble spore protein K -
  OD459_RS08650 (OD459_08650) - 1721454..1721612 (+) 159 WP_009335831.1 YpzG family protein -
  OD459_RS08655 (OD459_08655) - 1721673..1722002 (-) 330 WP_227889006.1 YfhH family protein -
  OD459_RS08660 (OD459_08660) - 1722180..1722851 (+) 672 WP_048011770.1 SDR family NAD(P)-dependent oxidoreductase -
  OD459_RS08665 (OD459_08665) recX 1722870..1723673 (-) 804 WP_263599844.1 recombination regulator RecX Regulator
  OD459_RS08670 (OD459_08670) - 1723778..1724683 (+) 906 WP_048011768.1 TIGR01777 family oxidoreductase -
  OD459_RS08675 (OD459_08675) - 1724758..1724883 (+) 126 WP_082139046.1 YfhE family protein -
  OD459_RS08680 (OD459_08680) - 1724977..1725165 (+) 189 WP_048011767.1 YfhD family protein -
  OD459_RS08685 (OD459_08685) - 1725221..1725724 (-) 504 WP_048011779.1 DoxX family protein -
  OD459_RS08690 (OD459_08690) - 1726051..1727112 (+) 1062 WP_048011766.1 M20 family metallopeptidase -
  OD459_RS08695 (OD459_08695) - 1727188..1727853 (+) 666 WP_163140274.1 vWA domain-containing protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 31622.13 Da        Isoelectric Point: 5.5695

>NTDB_id=737440 OD459_RS08665 WP_263599844.1 1722870..1723673(-) (recX) [Cytobacillus firmus strain M7]
MPTITKITVQKKNTDRYNIYMDYGKGEEYAFSVDEDVLIKHQLKKGMKLDEFSLNEIGYQDDIRKAYNRAIHYLSRRMRS
ETEVRKHLAEKEVEEPVIQEVIHKLYDYHFLNDEEFAAAFVRTQMNTSDKGKGLIRTELKEKGISPQLIEMALEEYPRDA
EVAAAIRLCEKYSKKYARDSSKILKQKLEQMLMRKGFNFDIIQEAVTETEIDKEEDEELAALRFQAEKAKKKYANLPEFE
YMQKMKQALFRKGFSFELIEQFLSEEE

Nucleotide


Download         Length: 804 bp        

>NTDB_id=737440 OD459_RS08665 WP_263599844.1 1722870..1723673(-) (recX) [Cytobacillus firmus strain M7]
ATGCCGACTATTACGAAAATCACAGTTCAGAAAAAAAACACAGACCGCTACAATATATATATGGATTATGGGAAAGGTGA
AGAATATGCATTTAGTGTGGATGAAGATGTTTTAATTAAGCATCAGCTAAAAAAGGGAATGAAGCTTGATGAATTCTCTT
TAAATGAAATTGGCTATCAGGATGATATCCGGAAAGCCTATAACAGGGCTATTCATTATTTATCCAGAAGAATGCGCTCA
GAAACCGAAGTCCGCAAACATTTAGCTGAAAAAGAAGTGGAAGAACCGGTTATTCAGGAAGTTATCCACAAATTGTATGA
TTACCATTTTTTAAATGATGAAGAATTTGCAGCAGCTTTTGTGCGTACACAAATGAACACATCAGATAAAGGTAAAGGCC
TGATCCGCACAGAACTAAAGGAAAAAGGGATTTCCCCTCAATTAATCGAAATGGCATTGGAGGAATATCCAAGGGATGCT
GAAGTAGCTGCCGCTATAAGGCTGTGTGAAAAATATTCAAAGAAATATGCTCGTGATTCATCCAAAATCCTTAAGCAAAA
GCTGGAACAGATGTTAATGCGCAAAGGCTTTAATTTCGACATCATTCAAGAAGCTGTAACTGAAACGGAGATTGATAAAG
AAGAGGATGAAGAACTGGCTGCCCTGAGGTTCCAGGCGGAAAAAGCGAAGAAGAAATATGCAAACCTTCCTGAGTTCGAA
TATATGCAAAAAATGAAGCAAGCCTTGTTCAGAAAAGGTTTTTCTTTTGAATTGATAGAGCAATTTTTAAGTGAAGAAGA
ATAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(88-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

49.813

100

0.498