Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   OD459_RS07230 Genome accession   NZ_CP107027
Coordinates   1448258..1448446 (-) Length   62 a.a.
NCBI ID   WP_048010971.1    Uniprot ID   A0A0J5VNI6
Organism   Cytobacillus firmus strain M7     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1443258..1453446
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OD459_RS07205 (OD459_07205) - 1443305..1444330 (-) 1026 WP_048010966.1 ABC transporter ATP-binding protein -
  OD459_RS07210 (OD459_07210) - 1444478..1445143 (-) 666 WP_053071383.1 DUF2268 domain-containing putative Zn-dependent protease -
  OD459_RS07215 (OD459_07215) fabF 1445382..1446620 (-) 1239 WP_048010968.1 beta-ketoacyl-ACP synthase II -
  OD459_RS07220 (OD459_07220) - 1446667..1447599 (-) 933 WP_048010969.1 beta-ketoacyl-ACP synthase III -
  OD459_RS07225 (OD459_07225) - 1447814..1448200 (+) 387 WP_048010970.1 hypothetical protein -
  OD459_RS07230 (OD459_07230) comZ 1448258..1448446 (-) 189 WP_048010971.1 ComZ family protein Regulator
  OD459_RS07235 (OD459_07235) med 1448476..1449432 (-) 957 WP_048010972.1 BMP family ABC transporter substrate-binding protein Regulator
  OD459_RS07240 (OD459_07240) - 1449542..1450369 (-) 828 WP_048010973.1 hypothetical protein -
  OD459_RS07245 (OD459_07245) - 1450448..1451185 (-) 738 WP_048010974.1 serine aminopeptidase domain-containing protein -
  OD459_RS07250 (OD459_07250) - 1451367..1451558 (+) 192 WP_048010975.1 DUF2929 family protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7268.43 Da        Isoelectric Point: 3.9646

>NTDB_id=737432 OD459_RS07230 WP_048010971.1 1448258..1448446(-) (comZ) [Cytobacillus firmus strain M7]
MNEKNMEFMQIAMKYLPEAKQQLDEAGIELSMEMIQPFMNLFIKVMNEAYEMGKTDALNESE

Nucleotide


Download         Length: 189 bp        

>NTDB_id=737432 OD459_RS07230 WP_048010971.1 1448258..1448446(-) (comZ) [Cytobacillus firmus strain M7]
ATGAACGAAAAAAACATGGAATTCATGCAAATCGCAATGAAATACTTGCCAGAAGCCAAACAGCAGCTTGACGAAGCAGG
CATCGAACTATCCATGGAAATGATCCAGCCATTCATGAACCTATTCATCAAAGTCATGAACGAAGCCTATGAAATGGGCA
AAACGGATGCTTTGAATGAGAGTGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0J5VNI6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

98.387

0.71