Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   P9J63_RS12935 Genome accession   NZ_CP121375
Coordinates   2617193..2618134 (-) Length   313 a.a.
NCBI ID   WP_001210792.1    Uniprot ID   A0A077GHT6
Organism   Acinetobacter baumannii strain LRT     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2612193..2623134
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P9J63_RS12920 (P9J63_12920) bauB 2614504..2615472 (-) 969 WP_005138319.1 siderophore-binding periplasmic lipoprotein BauB -
  P9J63_RS12925 (P9J63_12925) bauE 2615479..2616249 (-) 771 WP_032036284.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  P9J63_RS12930 (P9J63_12930) bauC 2616246..2617193 (-) 948 WP_001223286.1 ferric acinetobactin ABC transporter permease subunit BauC -
  P9J63_RS12935 (P9J63_12935) ceuB 2617193..2618134 (-) 942 WP_001210792.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  P9J63_RS12940 (P9J63_12940) basB 2618766..2620793 (+) 2028 WP_108496762.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  P9J63_RS12945 (P9J63_12945) basA 2620864..2622711 (-) 1848 WP_005138312.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33993.06 Da        Isoelectric Point: 8.6941

>NTDB_id=737235 P9J63_RS12935 WP_001210792.1 2617193..2618134(-) (ceuB) [Acinetobacter baumannii strain LRT]
MRFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLVCDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=737235 P9J63_RS12935 WP_001210792.1 2617193..2618134(-) (ceuB) [Acinetobacter baumannii strain LRT]
ATGCGATTTGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCATTATTGCTCGGGGCTGAACAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTGATTACCATTGTACTCA
CCGGTATCGGTTTGGCGGTATGTGGTGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACATCGGGC
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCATTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTTATTGGTTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCATATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTCATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTTGCACACCGCTTTACCGTGATTGGTATGGGTGAAGAGATGGCTTCTAGCTTAGGACTCA
GTTATGCAGCTATAGCCGCCATTGGTTTAATACTGGTTGCCATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCCATTGTGGC
TTTAGGTGGGGCGTCTCTATTACTGGTTTGCGACATTCTTGGTCGCTCAATCATTTATCCATTTGAAGTGCCAATTGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A077GHT6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.595

94.569

0.422