Detailed information NTG0737039

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: P9060_RS24990
• Genome accession: NZ_CP121356
• Coordinates: 4999767..5000792 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain rl0044
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4994767..5005792

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P9060_RS24970 (P9060_24970)	metJ	4995828..4996145 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
P9060_RS24975 (P9060_24975)	yiiX	4996329..4996937 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
P9060_RS24980 (P9060_24980)	rpmE	4996998..4997210 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
P9060_RS24985 (P9060_24985)	priA	4997413..4999611 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
P9060_RS24990 (P9060_24990)	cytR	4999767..5000792 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
P9060_RS24995 (P9060_24995)	ftsN	5000884..5001843 (+)	960	WP_000068828.1	cell division protein FtsN	-
P9060_RS25000 (P9060_25000)	hslV	5001936..5002466 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
P9060_RS25005 (P9060_25005)	hslU	5002476..5003807 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
P9060_RS25010 (P9060_25010)	menA	5003874..5004800 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
P9060_RS25015 (P9060_25015)	rraA	5004893..5005378 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
P9060_RS25020 (P9060_25020)	zapB	5005463..5005708 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=737039 P9060_RS24990 WP_000644904.1 4999767..5000792(+) (cytR) [Escherichia coli strain rl0044]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=737039 P9060_RS24990 WP_000644904.1 4999767..5000792(+) (cytR) [Escherichia coli strain rl0044]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628