Detailed information NTG0736868

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: P9N54_RS19045
• Genome accession: NZ_CP121294
• Coordinates: 3955305..3956330 (-)
• Length: 341 a.a.
• NCBI ID: WP_136721307.1
• Uniprot ID: -
• Organism: Escherichia coli O155:H21 strain NWU_1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3950305..3961330

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P9N54_RS19015 (P9N54_19015)	zapB	3950389..3950634 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
P9N54_RS19020 (P9N54_19020)	rraA	3950719..3951204 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
P9N54_RS19025 (P9N54_19025)	menA	3951297..3952223 (-)	927	WP_001307494.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
P9N54_RS19030 (P9N54_19030)	hslU	3952290..3953621 (-)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
P9N54_RS19035 (P9N54_19035)	hslV	3953631..3954161 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
P9N54_RS19040 (P9N54_19040)	ftsN	3954254..3955213 (-)	960	WP_000068834.1	cell division protein FtsN	-
P9N54_RS19045 (P9N54_19045)	cytR	3955305..3956330 (-)	1026	WP_136721307.1	DNA-binding transcriptional regulator CytR	Regulator
P9N54_RS19050 (P9N54_19050)	priA	3956486..3958684 (-)	2199	WP_001315935.1	primosomal protein N'	Machinery gene
P9N54_RS19055 (P9N54_19055)	rpmE	3958887..3959099 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
P9N54_RS19060 (P9N54_19060)	-	3959259..3959492 (+)	234	Protein_3763	DUF6531 domain-containing protein	-
P9N54_RS19065 (P9N54_19065)	hemG	3959583..3960128 (-)	546	WP_000853969.1	menaquinone-dependent protoporphyrinogen IX dehydrogenase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37918.92 Da
• Isoelectric Point: 6.5973

>NTDB_id=736868 P9N54_RS19045 WP_136721307.1 3955305..3956330(-) (cytR) [Escherichia coli O155:H21 strain NWU_1]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQRLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=736868 P9N54_RS19045 WP_136721307.1 3955305..3956330(-) (cytR) [Escherichia coli O155:H21 strain NWU_1]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTATCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GAGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625