Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   P8R49_RS18565 Genome accession   NZ_CP121266
Coordinates   3444672..3445385 (-) Length   237 a.a.
NCBI ID   WP_014481000.1    Uniprot ID   -
Organism   Bacillus subtilis strain 107105     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3439672..3450385
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P8R49_RS18545 (P8R49_18545) ghrB 3439817..3440794 (+) 978 WP_072592561.1 D-glycerate dehydrogenase -
  P8R49_RS18550 (P8R49_18550) psdB 3440831..3442771 (-) 1941 WP_014480997.1 lantibiotic ABC transporter permease PsdB -
  P8R49_RS18555 (P8R49_18555) psdA 3442746..3443525 (-) 780 WP_014480998.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  P8R49_RS18560 (P8R49_18560) psdS 3443608..3444678 (-) 1071 WP_014480999.1 two-component sensor histidine kinase PsdS -
  P8R49_RS18565 (P8R49_18565) braR 3444672..3445385 (-) 714 WP_014481000.1 two-component system response regulator PsdR Regulator
  P8R49_RS18570 (P8R49_18570) - 3445532..3445740 (+) 209 Protein_3590 hypothetical protein -
  P8R49_RS18575 (P8R49_18575) yvcN 3445776..3446540 (-) 765 WP_015251150.1 arylamine N-acetyltransferase -
  P8R49_RS18580 (P8R49_18580) crh 3446541..3446798 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  P8R49_RS18585 (P8R49_18585) whiA 3446822..3447772 (-) 951 WP_003228147.1 DNA-binding protein WhiA -
  P8R49_RS18590 (P8R49_18590) mgfK 3447795..3448748 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  P8R49_RS18595 (P8R49_18595) rapZ 3448750..3449637 (-) 888 WP_003243903.1 RNase adapter RapZ -
  P8R49_RS18600 (P8R49_18600) rppI 3449662..3450138 (-) 477 WP_014481002.1 NUDIX domain-containing protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27541.46 Da        Isoelectric Point: 4.6774

>NTDB_id=736789 P8R49_RS18565 WP_014481000.1 3444672..3445385(-) (braR) [Bacillus subtilis strain 107105]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RIDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSSRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=736789 P8R49_RS18565 WP_014481000.1 3444672..3445385(-) (braR) [Bacillus subtilis strain 107105]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGATTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGATCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGTGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCTCCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTTTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCCGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.982

94.515

0.435