Detailed information    

insolico Bioinformatically predicted

Overview


Name   comGA   Type   Machinery gene
Locus tag   FNQ92_RS15690 Genome accession   NZ_AP019731
Coordinates   2954145..2955188 (-) Length   347 a.a.
NCBI ID   WP_001013201.1    Uniprot ID   A0A6L8PIF1
Organism   Bacillus anthracis strain PCr     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2949145..2960188
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FNQ92_RS15645 (BAPCR_03199) - 2949573..2949773 (-) 201 WP_000106085.1 YqzE family protein -
  FNQ92_RS15650 (BAPCR_03200) aroK 2949812..2950309 (-) 498 WP_000836640.1 shikimate kinase AroK -
  FNQ92_RS15655 (BAPCR_03201) - 2950430..2951080 (-) 651 WP_000183878.1 2OG-Fe(II) oxygenase -
  FNQ92_RS15660 comGG 2951256..2951626 (-) 371 Protein_3109 competence type IV pilus minor pilin ComGG -
  FNQ92_RS15665 (BAPCR_03203) comGF 2951623..2952093 (-) 471 WP_038414201.1 competence type IV pilus minor pilin ComGF -
  FNQ92_RS15670 (BAPCR_03204) comGE 2952063..2952365 (-) 303 WP_000829456.1 competence type IV pilus minor pilin ComGE -
  FNQ92_RS15675 (BAPCR_03205) comGD 2952358..2952813 (-) 456 WP_000810395.1 comG operon protein ComGD -
  FNQ92_RS15680 (BAPCR_03206) comGC 2952810..2953109 (-) 300 WP_001178678.1 comG operon protein ComGC -
  FNQ92_RS15685 (BAPCR_03207) comGB 2953121..2954152 (-) 1032 WP_000471910.1 comG operon protein ComGB -
  FNQ92_RS15690 (BAPCR_03208) comGA 2954145..2955188 (-) 1044 WP_001013201.1 competence protein ComGA Machinery gene
  FNQ92_RS15695 (BAPCR_03209) - 2955394..2956089 (+) 696 WP_000434119.1 helix-turn-helix transcriptional regulator -
  FNQ92_RS15700 (BAPCR_03210) - 2956215..2956457 (+) 243 WP_000440708.1 DUF2626 domain-containing protein -
  FNQ92_RS15705 (BAPCR_03211) - 2956565..2957959 (+) 1395 WP_001094329.1 L-cystine transporter -
  FNQ92_RS15710 (BAPCR_03212) - 2958134..2958541 (-) 408 WP_000877909.1 hypothetical protein -
  FNQ92_RS15715 (BAPCR_03213) - 2958629..2958844 (-) 216 WP_001008320.1 DUF3912 family protein -
  FNQ92_RS15720 (BAPCR_03214) - 2959097..2959408 (+) 312 WP_001093243.1 hypothetical protein -
  FNQ92_RS15725 (BAPCR_03215) - 2959445..2959933 (-) 489 WP_000764252.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39354.93 Da        Isoelectric Point: 9.3530

>NTDB_id=73664 FNQ92_RS15690 WP_001013201.1 2954145..2955188(-) (comGA) [Bacillus anthracis strain PCr]
MNGIESFANMILKEACRVQASDLHIVPRQKDVVVQLRIGKDLMTKYCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLRYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRNDDVLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDARGAILRFMGFGITRQEIEQSLLAIAAQRLVELKCPFCKRKCSTLCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLQSSIRKGYALGFLEEDVYV

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=73664 FNQ92_RS15690 WP_001013201.1 2954145..2955188(-) (comGA) [Bacillus anthracis strain PCr]
ATGAATGGAATTGAAAGCTTTGCGAATATGATTTTGAAAGAAGCGTGCAGGGTACAAGCGTCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGTGGTTCAGCTGCGTATAGGAAAAGATTTAATGACGAAATATTGTATTGAAAAGGAATTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCTATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAAGAAGTGTATTTGCGTCTTTCCACGCTTCCAACCGTATACCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
GTTATTCTCATGGATTACTCGTATTTACTGGACCGACTGGTTCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGCATCGTTACACTGGAAGATCCAGTTGAAAAAAGAAATGACGATGTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTCG
GTGAAATTCGTGATGAAGAAACAGCGAAAATTGCTATAAGAGCAAGTTTGACTGGCCATTTAGTAATGACGACATTGCAT
ACGAATGATGCGAGAGGGGCGATACTTCGGTTCATGGGTTTTGGCATAACGAGGCAAGAAATCGAACAATCTTTATTAGC
TATAGCTGCACAGCGACTTGTCGAATTAAAGTGTCCGTTTTGCAAAAGAAAGTGCTCAACTTTATGCAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACATACAAGCACGAAACATTACAATCTTCGATACGAAAAGGATACGCTTTAGGGTTTTTAGAAGAAGATGTTTATGT
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6L8PIF1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGA Bacillus subtilis subsp. subtilis str. 168

57.925

100

0.579

  pilB Vibrio campbellii strain DS40M4

35.977

100

0.366


Multiple sequence alignment